RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 S1PR4O95977 384 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ENO3P13929 434 aaPredicted RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 POLR2CP19387 275 aaPredicted RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 STX2P32856 288 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CARSP49589 748 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 SEPHS1P49903 392 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 RAB28P51157 221 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CLCN7P51798 805 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 KPNA2P52292 529 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ERVPABLB-1P60509 514 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 GBX1Q14549 363 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ACSBG2Q5FVE4 666 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 RBM20Q5T481 1227 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 TEDDM1Q5T9Z0 273 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CACHD1Q5VU97 1274 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ZNF549Q6P9A3 640 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 GALNT7Q86SF2 657 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CLEC14AQ86T13 490 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 AMIGO1Q86WK6 493 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CPNE9Q8IYJ1 553 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 MMGT1Q8N4V1 131 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 RAB42Q8N4Z0 105 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 OR4E2Q8NGC2 313 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 SEC14L1Q92503 715 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 UBXN4Q92575 508 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CDKL2Q92772 493 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 PMEPA1Q969W9 287 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 PRR11Q96HE9 360 aaPredicted RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ZNF578Q96N58 590 aaPredicted RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 FMO2Q99518 471 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 MAP3K3Q99759 626 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 RAB11FIP5Q9BXF6 653 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 FAM129AQ9BZQ8 928 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 RAB33BQ9H082 229 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 XKR8Q9H6D3 395 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 FAM114A2Q9NRY5 505 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 HRASLS2Q9NWW9 162 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 SIDT1Q9NXL6 827 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 NSMCE4AQ9NXX6 385 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 TAS2R13Q9NYV9 303 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 ACTR10Q9NZ32 417 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 FOXJ2Q9P0K8 574 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 PDP2Q9P2J9 529 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 TXNDC16Q9P2K2 825 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 EPHA6Q9UF33 1036 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CIDEBQ9UHD4 219 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 POLG2Q9UHN1 485 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 CORO1CQ9ULV4 474 aaPredicted RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 MED16Q9Y2X0 877 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 NFS1Q9Y697 457 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 SEC16AO15027 2179 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 BOD1L1Q8NFC6 3051 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 MDC1Q14676 2089 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 PCM1Q15154 2024 aa6.86□□□□□ -1.31
COMMD1-205ENST00000455659 SMG1Q96Q15 3661 aaKnown RBP6.86□□□□□ -1.31
COMMD1-205ENST00000455659 IGHV5-51A0A0C4DH38 117 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TCRBV9S1A1TA0A576 114 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 PIPSLA2A3N6 862 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 KRT87PA6NCN2 255 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 ARHGEF33A8MVX0 844 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 C2orf74A8MZ97 194 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 B4E171 279 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 C9orf172C9J069 976 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 BTN3A3O00478 584 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 RASGRF2O14827 1237 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TOX3O15405 576 aaPredicted RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 RRP8O43159 456 aaKnown RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 KIF1CO43896 1103 aaKnown RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 SPAG6O75602 509 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 HAUS5O94927 633 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CATP04040 527 aaKnown RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CHRM5P08912 532 aaPredicted RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 FGF3P11487 239 aaPredicted RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CCL4P13236 92 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CDH3P22223 829 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 MCM3P25205 808 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 SSTR1P30872 391 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CCNFP41002 786 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TSPAN7P41732 249 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 ARL4DP49703 201 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 RGS4P49798 205 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CDKN2DP55273 166 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 SH3BP2P78314 561 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 FOXM1Q08050 763 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 ABRQ12979 859 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 PDAP1Q13442 181 aaKnown RBP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TUBB3Q13509 450 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 EFTUD2Q15029 972 aaKnown RBP eCLIP6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TRADDQ15628 312 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 KLHL38Q2WGJ6 581 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TMEM164Q5U3C3 297 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 ANKS6Q68DC2 871 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 LRRC8EQ6NSJ5 796 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 FAM45BPQ6NSW5 357 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 UGT3A1Q6NUS8 523 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 CYB5D1Q6P9G0 228 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 TTC23LQ6PF05 361 aa6.85□□□□□ -1.31
COMMD1-205ENST00000455659 SPESP1Q6UW49 350 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms