RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MARCKSL1P49006 195 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CLCNKAP51800 687 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 GFRA1P56159 465 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 WNT3AP56704 352 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CDC20Q12834 499 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 GPR18Q14330 331 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 NFE2L1Q14494 772 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ODF2Q5BJF6 829 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SIRPB2Q5JXA9 342 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 PRAMEF17Q5VTA0 474 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CACHD1Q5VU97 1274 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 IRGCQ6NXR0 463 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM199XQ6PEV8 388 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FBXO38Q6PIJ6 1188 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 POMZP3Q6PJE2 187 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 KDELC1Q6UW63 502 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ABRAXAS1Q6UWZ7 409 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM151BQ6UXP7 276 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SPOCD1Q6ZMY3 1216 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM83HQ6ZRV2 1179 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 DET1Q7L5Y6 550 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TSPYL5Q86VY4 417 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 MYO18BQ8IUG5 2567 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CREG2Q8IUH2 290 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TRAPPC5Q8IUR0 188 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RASGRP3Q8IV61 690 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 VSTM4Q8IW00 320 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RHOT1Q8IXI2 618 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RAVER1Q8IY67 606 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF567Q8N184 647 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RASGEF1AQ8N9B8 481 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 IPMKQ8NFU5 416 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 BLOC1S5Q8TDH9 187 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TFB1MQ8WVM0 346 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 STARD8Q92502 1023 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CXorf40BQ96DE9 158 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 IQCDQ96DY2 449 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 OXNAD1Q96HP4 312 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CCDC42Q96M95 316 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 PPM1MQ96MI6 270 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TTC25Q96NG3 672 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TEFMQ96QE5 360 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RUFY1Q96T51 708 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 NRTNQ99748 197 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM118BQ9BPY3 351 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 APOL2Q9BQE5 337 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ZSCAN5AQ9BUG6 496 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 HEMGNQ9BXL5 484 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ULBP3Q9BZM4 244 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TRIT1Q9H3H1 467 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC40A1Q9NP59 571 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ABHD10Q9NUJ1 306 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 HAUS2Q9NVX0 235 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNHIT6Q9NWK9 470 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 FAM153AQ9UHL3 310 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 CROTQ9UKG9 612 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TCFL5Q9UL49 500 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 TMEM184BQ9Y519 407 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ALG6Q9Y672 507 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 ARL5AQ9Y689 179 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 RPS6KL1Q9Y6S9 549 aa4.59□□□□□ -1.67
GTF3C3-208ENST00000455546 SHANK1Q9Y566 2161 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZGRF1Q86YA3 2104 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 BSNQ9UPA5 3926 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 MN1Q10571 1320 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 IGHV5-51A0A0C4DH38 117 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 LILRA5A6NI73 299 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 H7C0C1 242 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 CCL22O00626 93 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 VEGFDO43915 354 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 MFAP3LO75121 409 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SPAG6O75602 509 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DNAJB5O75953 348 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZRANB2O95218 330 aaKnown RBP eCLIP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 NDUFA10O95299 355 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 POLBP06746 335 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TPM3P06753 285 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 THBDP07204 575 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 EBLN1P0CF75 366 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC2A4P14672 509 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ZFXP17010 805 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RBL1P28749 1068 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 HMGCLP35914 325 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SPAM1P38567 509 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 STAT5AP42229 794 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC1A1P43005 524 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 MAGEA1P43355 309 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ATP5OP48047 213 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 NR2C2P49116 596 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 CLCN7P51798 805 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 GYS2P54840 703 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 MLLT10P55197 1068 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 DCDC1P59894 354 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 RPS18P62269 152 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 TMPRSS15P98073 1019 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 POU4F1Q01851 419 aa4.58□□□□□ -1.68
GTF3C3-208ENST00000455546 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms