RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 TRAFD1O14545 582 aaPredicted RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 HTRA2O43464 458 aaPredicted RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SLC19A2O60779 497 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 URI1O94763 535 aaPredicted RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CPP00450 1065 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 MMP2P08253 660 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PSMB4P28070 264 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 COILP38432 576 aaPredicted RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SPAM1P38567 509 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TNNT3P45378 269 aaPredicted RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 KCNJ1P48048 391 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ARL4DP49703 201 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DMPKQ09013 629 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 AIMP2Q13155 320 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ACOX1Q15067 660 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SLC14A2Q15849 920 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 INAQ16352 499 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PYCR3Q53H96 274 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PLEKHS1Q5SXH7 462 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ARMC12Q5T9G4 340 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 IRAK1BP1Q5VVH5 260 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 LCN10Q6JVE6 187 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CCDC137Q6PK04 289 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DOK6Q6PKX4 331 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 FAM92BQ6ZTR7 304 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DSELQ8IZU8 1212 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DNAAF3Q8N9W5 541 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 OR1N1Q8NGS0 311 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 OR8K5Q8NH50 307 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 KIF18AQ8NI77 898 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GRK7Q8WTQ7 553 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 UBXN4Q92575 508 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ECHDC3Q96DC8 303 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 NUS1Q96E22 293 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 IMP4Q96G21 291 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SLC41A2Q96JW4 573 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 NSMCE3Q96MG7 304 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PPP1R2P1Q96PQ5 205 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 FCRL5Q96RD9 977 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TRIM56Q9BRZ2 755 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TDRD1Q9BXT4 1180 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DRG1Q9Y295 367 aaKnown RBP9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PLEKHA6Q9Y2H5 1048 aa9.3□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CCDC78A2IDD5 438 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GOLGA6CA6NDK9 693 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CCDC188H7C350 402 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 LDB2O43679 373 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ANXA9O76027 345 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PGLSO95336 258 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 MT-CYBP00156 380 aaPredicted RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GOLGA6DP0CG33 693 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GEMP55040 296 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CKAP4Q07065 602 aaKnown RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 RALGDSQ12967 914 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 MYBPHQ13203 477 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 MPP3Q13368 585 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 KCNAB1Q14722 419 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 NCF4Q15080 339 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PCSK7Q16549 785 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 C3AR1Q16581 482 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 IRGCQ6NXR0 463 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TTC27Q6P3X3 843 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ZSWIM9Q86XI8 627 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GALNT13Q8IUC8 556 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SLC38A9Q8NBW4 561 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SPATA22Q8NHS9 363 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CPT1BQ92523 772 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TADA1Q96BN2 335 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 LRRC45Q96CN5 670 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 RMND5BQ96G75 393 aaPredicted RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 OXNAD1Q96HP4 312 aaPredicted RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 RUNDC3BQ96NL0 473 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 NDC1Q9BTX1 674 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DHRS4Q9BTZ2 278 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 FSD1LQ9BXM9 530 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 DDX47Q9H0S4 455 aaKnown RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 LIME1Q9H400 295 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PCDH9Q9HC56 1237 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 P4HTMQ9NXG6 502 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GOLGA6AQ9NYA3 693 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 UBP1Q9NZI7 540 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PAK5Q9P286 719 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TBC1D29Q9UFV1 150 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 FAM153AQ9UHL3 310 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 TINAGQ9UJW2 476 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CHKBQ9Y259 395 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 AAR2Q9Y312 384 aaKnown RBP9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 MEMO1Q9Y316 297 aa9.29□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ESPNB1AK53 854 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 C9J4A7 227 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 FZD6O60353 706 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 PMPCBO75439 489 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 SIX3O95343 332 aaPredicted RBP9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 GAS8O95995 478 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 CAPN1P07384 714 aa9.28□□□□□ -0.92
NIPSNAP1-204ENST00000455496 ZSCAN5DPP0CG00 497 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms