RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 B2RBV5 119 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 KMOO15229 486 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 GYG2O15488 501 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 C1orf105O95561 183 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 HGFP14210 728 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 PIK3R1P27986 724 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 ACSL1P33121 698 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 DGKEP52429 567 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 PRKCQQ04759 706 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 PLA2G4EQ3MJ16 856 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 FAM83HQ6ZRV2 1179 aaPredicted RBP13.9□□□□□ -0.18
USP39-207ENST00000450066 RINLQ6ZS11 566 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 Q6ZS52 159 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 OR2T34Q8NGX1 318 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 HMGB4Q8WW32 186 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 MARK4Q96L34 752 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 C1orf21Q9H246 121 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 ITM2CQ9NQX7 267 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 POLG2Q9UHN1 485 aa13.9□□□□□ -0.18
USP39-207ENST00000450066 NUMA1Q14980 2115 aa13.9□□□□□ -0.19
USP39-207ENST00000450066 LRRC72A6NJI9 287 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 CHURC1-FNTBB4DL54 471 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SLC31A1O15431 190 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 WDR47O94967 919 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 KRT16P08779 473 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 THRAP10827 490 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 COX4I1P13073 169 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 EPORP19235 508 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 ACADLP28330 430 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 CPA2P48052 419 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 POU5F2Q8N7G0 328 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 DENND6BQ8NEG7 585 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 TUBGCP3Q96CW5 907 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 MIPEPQ99797 713 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 OR52A5Q9H2C5 316 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 RMI1Q9H9A7 625 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SGK2Q9HBY8 427 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 TRPS1Q9UHF7 1281 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 PRDM4Q9UKN5 801 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 CA14Q9ULX7 337 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SLC17A4Q9Y2C5 497 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 CLDN9O95484 217 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 HOXC4P09017 264 aaPredicted RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 PRR35P0CG20 571 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 LBPP18428 481 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 BDKRB1P46663 353 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 ATP4BP51164 291 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 PFN3P60673 137 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SQLEQ14534 574 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 METRNLQ641Q3 311 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 UNC5DQ6UXZ4 953 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 RNF165Q6ZSG1 346 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SYT13Q7L8C5 426 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 PDZD3Q86UT5 571 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 KLHDC8AQ8IYD2 350 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 DEFB123Q8N688 67 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 RBM15BQ8NDT2 890 aaKnown RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 RP9Q8TA86 221 aaKnown RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 PYCR2Q96C36 320 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 PKP4Q99569 1192 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 APOOQ9BUR5 198 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 SLC40A1Q9NP59 571 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 DNAJC11Q9NVH1 559 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 RIC8BQ9NVN3 520 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 STOX2Q9P2F5 926 aaPredicted RBP13.89□□□□□ -0.19
USP39-207ENST00000450066 DOCK9Q9BZ29 2069 aa13.89□□□□□ -0.19
USP39-207ENST00000450066 LOC100653049A0A140TA62 436 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 CACNB4O00305 520 aaPredicted RBP13.88□□□□□ -0.19
USP39-207ENST00000450066 KRT34O76011 436 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 SLC16A8O95907 504 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 IGLV3-19P01714 112 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 CEACAM5P06731 702 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 HMOX2P30519 316 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 IRX1P78414 480 aaPredicted RBP13.88□□□□□ -0.19
USP39-207ENST00000450066 LRRC32Q14392 662 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 HERC3Q15034 1050 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 CCSMST1Q4G0I0 132 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 AGTRAPQ6RW13 159 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 LONP2Q86WA8 852 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 C10orf67Q8IYJ2 551 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 SNX31Q8N9S9 440 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
USP39-207ENST00000450066 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 ZDHHC5Q9C0B5 715 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 ATG10Q9H0Y0 220 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 FZD3Q9NPG1 666 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 TM7SF3Q9NS93 570 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 EBF1Q9UH73 591 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 SLC22A14Q9Y267 594 aa13.88□□□□□ -0.19
USP39-207ENST00000450066 MRPS17Q9Y2R5 130 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms