RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 TMEM135Q86UB9 458 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 SLC22A15Q8IZD6 547 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 OR1L3Q8NH93 324 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 MR1Q95460 341 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 OR2A14Q96R47 310 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 KIFC1Q9BW19 673 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 CARD6Q9BX69 1037 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 TWSG1Q9GZX9 223 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 SPHK1Q9NYA1 384 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 OR6C2Q9NZP2 312 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
SEC22C-209ENST00000449617 MAP3K7O43318 606 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 GPC4O75487 556 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 ZIC2O95409 532 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 APOA4P06727 396 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 CYP2A7P20853 494 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 ARNTP27540 789 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 AOAHP28039 575 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 PTPN4P29074 926 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 RPS18P62269 152 aaKnown RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 GPS1Q13098 491 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 KCNJ11Q14654 390 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 TTC27Q6P3X3 843 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 CDHR3Q6ZTQ4 885 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 RASGEF1CQ8N431 466 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 C19orf47Q8N9M1 422 aaKnown RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 C9orf43Q8TAL5 461 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 ASZ1Q8WWH4 475 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 CPT1BQ92523 772 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 MFSD3Q96ES6 412 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 GPR87Q9BY21 358 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 CHST8Q9H2A9 424 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 MRM3Q9HC36 420 aaKnown RBP12.65□□□□□ -0.38
SEC22C-209ENST00000449617 SYTL2Q9HCH5 934 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 POLHQ9Y253 713 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 JRKLQ9Y4A0 524 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 KCNMB2Q9Y691 235 aa12.65□□□□□ -0.38
SEC22C-209ENST00000449617 MYO18BQ8IUG5 2567 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 GOLGA8KD6RF30 607 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 NDUFS3O75489 264 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 VAPBO95292 243 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 PEBP1P30086 187 aaKnown RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 PKLRP30613 574 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 RORAP35398 523 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 MAGEA6P43360 314 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ITGA1P56199 1179 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 RPS15P62841 145 aaKnown RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 TMED2Q15363 201 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ZIC1Q15915 447 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 PLEKHS1Q5SXH7 462 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ANKRD22Q5VYY1 191 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 LCN10Q6JVE6 187 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF517Q6ZMY9 492 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 PTRH1Q86Y79 214 aaKnown RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 DSELQ8IZU8 1212 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 CFAP61Q8NHU2 1237 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 CLIP3Q96DZ5 547 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 PBKQ96KB5 322 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 P2RY12Q9H244 342 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 FAM60AQ9NP50 221 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 CIDEBQ9UHD4 219 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 FLNBO75369 2602 aaKnown RBP12.64□□□□□ -0.39
SEC22C-209ENST00000449617 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
SEC22C-209ENST00000449617 A0A0J9YY10 115 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 MEN1O00255 615 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 SUV39H1O43463 412 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 KDM1AO60341 852 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 AVILO75366 819 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 TMEM63AO94886 807 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 SLCO2B1O94956 709 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 KRT14P02533 472 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 KLK3P07288 261 aaPredicted RBP12.63□□□□□ -0.39
SEC22C-209ENST00000449617 RPS3P23396 243 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC22C-209ENST00000449617 RAB28P51157 221 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 EIF3BP55884 814 aaKnown RBP12.63□□□□□ -0.39
SEC22C-209ENST00000449617 IL10RAQ13651 578 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 DEFB110Q30KQ9 67 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 IZUMO3Q5VZ72 239 aa12.63□□□□□ -0.39
SEC22C-209ENST00000449617 UNC5DQ6UXZ4 953 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms