RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 MAFBQ9Y5Q3 323 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 METTL21EPA6NDL7 271 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PRORSD1PA6NEY8 169 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FAM159BA6NKW6 160 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC2A2P11168 524 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PRPS1L1P21108 318 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ACSL1P33121 698 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 RYKP34925 604 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CLCN4P51793 760 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 LILRA4P59901 499 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PPP3R1P63098 170 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ATXN7L2Q5T6C5 722 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 UBAP2Q5T6F2 1119 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FAAH2Q6GMR7 532 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CES5AQ6NT32 575 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TUBA3EQ6PEY2 450 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 QSOX2Q6ZRP7 698 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 USP50Q70EL3 339 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC30A8Q8IWU4 369 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TMBIM1Q969X1 311 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZBED6CLQ96FA7 236 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZSWIM3Q96MP5 696 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CLCC1Q96S66 551 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PKP2Q99959 881 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC6A15Q9H2J7 730 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 DPEP3Q9H4B8 488 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TBC1D14Q9P2M4 693 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM59LQ9UK28 342 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NID2Q14112 1375 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ANKRD26Q9UPS8 1709 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 DAPL1A0PJW8 107 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 J3QRK9 145 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PRAMEF12O95522 483 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SERPINA3P01011 423 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 IFNA7P01567 189 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 DBIP07108 87 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PTGS2P35354 604 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TUBA1BP68363 451 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FOXM1Q08050 763 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF234Q14588 700 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 MOGQ16653 247 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF829Q3KNS6 432 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PLA2G4EQ3MJ16 856 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TPRG1LQ5T0D9 272 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 DCAF12L1Q5VU92 463 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC30A6Q6NXT4 461 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TUBA1AQ71U36 451 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 LINGO2Q7L985 606 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CFAP206Q8IYR0 622 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZFAND2BQ8WV99 257 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ING5Q8WYH8 240 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FBXL8Q96CD0 374 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FEM1CQ96JP0 617 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 RNF208Q9H0X6 261 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 IGFLR1Q9H665 355 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 AKTIPQ9H8T0 292 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 RC3H2Q9HBD1 1191 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ZIM2Q9NZV7 527 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ACTR3BQ9P1U1 418 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 MGAT4AQ9UM21 535 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PCDHGA3Q9Y5H0 932 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 A8MT66 165 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CHRNA4P43681 627 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 ARCN1P48444 511 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NDUFV1P49821 464 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 GSK3BP49841 420 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 INHBEP58166 350 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TXNL4AP83876 142 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 TSC22D1Q15714 1073 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CYP2U1Q7Z449 544 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SLC51AQ86UW1 340 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SAMD14Q8IZD0 417 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 LGI4Q8N135 537 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 FIBCD1Q8N539 461 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 NAT16Q8N8M0 369 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CNDP2Q96KP4 475 aaKnown RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CAMK1GQ96NX5 476 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 CHIAQ9BZP6 476 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 MAF1Q9H063 256 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 AJAP1Q9UKB5 411 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 SNX10Q9Y5X0 201 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 KNDC1Q76NI1 1749 aa7.64□□□□□ -1.19
NEDD9-204ENST00000448183 COL5A2P05997 1499 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-204ENST00000448183 A0A0G2JPF8 293 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 TCRBV7S3A2A0A539 114 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 OR6C70A6NIJ9 312 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 CXorf49A8MYA2 514 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-204ENST00000448183 HNRNPCL3B7ZW38 293 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 POP4O95707 220 aaKnown RBP7.63□□□□□ -1.19
NEDD9-204ENST00000448183 HMGN1P05114 100 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 HNRNPCL4P0DMR1 293 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 AKT2P31751 481 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 GSCP56915 257 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-204ENST00000448183 SLC18A2Q05940 514 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 DGKZQ13574 1117 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 CRB2Q5IJ48 1285 aa7.63□□□□□ -1.19
NEDD9-204ENST00000448183 OR2T5Q6IEZ7 315 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms