RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CREG1O75629 220 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 IFNW1P05000 195 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ALPIP09923 528 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 RFC2P35250 354 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 AP1S2P56377 157 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 IL18R1Q13478 541 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 RFTN2Q52LD8 501 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 OGFOD2Q6N063 350 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ARMC6Q6NXE6 501 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 UGT2A3Q6UWM9 527 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CNTN4Q8IWV2 1026 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 PIH1D2Q8WWB5 315 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 IGSF8Q969P0 613 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 FNDC11Q9BVV2 318 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 DHRS7Q9Y394 339 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 TMED5Q9Y3A6 229 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 PCDHB3Q9Y5E6 796 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CENPXA8MT69 81 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MANBAO00462 879 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MPZL2O60487 215 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CBSLP0DN79 551 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 CBSP35520 551 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ACLYP53396 1101 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 SH3BP2P78314 561 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 IFI44LQ53G44 452 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MARCH8Q5T0T0 291 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ARMC1Q9NVT9 282 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 STRCQ7RTU9 1775 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 LOC100130705A0A1B0GUX0 176 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 FADS2P1A8MWK0 482 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 NEDD8-MDP1E9PL57 170 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 MATN4O95460 622 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 SGCGQ13326 291 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 SYVN1Q86TM6 617 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 UBASH3BQ8TF42 649 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF282Q9UDV7 671 aaPredicted RBP16.31■□□□□ 0.2
TCOF1-206ENST00000445265 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
TCOF1-206ENST00000445265 OR2AG2A6NM03 316 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SOCS7O14512 581 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 LAG3P18627 525 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 RFX3P48380 749 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 INHBCP55103 352 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 NPTX1Q15818 432 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TPGS2Q68CL5 300 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 NEK10Q6ZWH5 1172 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 AKAP14Q86UN6 197 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 LRCH3Q96II8 777 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TUBA1CQ9BQE3 449 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TOR3AQ9H497 397 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SERHL2Q9H4I8 314 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SERHLQ9NQF3 203 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 A0A0D9SEW6 157 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TRIM43BA6NCK2 446 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 LOC730098B7Z3J9 87 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 FGF4P08620 206 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CBX3Q13185 183 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CHRNA6Q15825 494 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 MZT2BQ6NZ67 158 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 DEF8Q6ZN54 512 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 C17orf64Q86WR6 236 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 MINDY2Q8NBR6 621 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CAPSLQ8WWF8 208 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF347Q96SE7 839 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 GIN1Q9NXP7 522 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ABCA3Q99758 1704 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ANXA8P13928 327 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 IL12RB1P42701 662 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 LDLRAD1Q5T700 205 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF57Q68EA5 555 aaPredicted RBP16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CLEC14AQ86T13 490 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SLC34A3Q8N130 599 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ANKRD49Q8WVL7 239 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 HDAC2Q92769 488 aaKnown RBP16.3■□□□□ 0.2
TCOF1-206ENST00000445265 USP7Q93009 1102 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 BIRC8Q96P09 236 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 GSTO2Q9H4Y5 243 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
TCOF1-206ENST00000445265 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 LOC110117498-PIK3R3F6TDL0 507 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 TMCC2O75069 709 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 SNAP29O95721 258 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 HNF4AP41235 474 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 ENTPD1P49961 510 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CEP78Q5JTW2 689 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 KANK2Q63ZY3 851 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 CLDN19Q8N6F1 224 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 WDR36Q8NI36 951 aaKnown RBP16.3■□□□□ 0.2
TCOF1-206ENST00000445265 KHSRPQ92945 711 aaKnown RBP eCLIP16.3■□□□□ 0.2
TCOF1-206ENST00000445265 PYURFQ96I23 114 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 MUS81Q96NY9 551 aa16.3■□□□□ 0.2
TCOF1-206ENST00000445265 NDEL1Q9GZM8 345 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms