RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PLEKHG6Q3KR16 790 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 PRSS36Q5K4E3 855 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 CEP68Q76N32 757 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 OR56A4Q8NGH8 313 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 SCAMP5Q8TAC9 235 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 ZNF221Q9UK13 617 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 EIF3LQ9Y262 564 aaKnown RBP19.89■□□□□ 0.77
SHOX2-203ENST00000441443 PEX11BO96011 259 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 AP5B1Q2VPB7 878 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 AADATQ8N5Z0 425 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 IL17RDQ8NFM7 739 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 METTL6Q8TCB7 284 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 CLIP3Q96DZ5 547 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 SLC25A37Q9NYZ2 338 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 CDH9Q9ULB4 789 aa19.89■□□□□ 0.77
SHOX2-203ENST00000441443 TTC3P53804 2025 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 MYO1GB0I1T2 1018 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 DIRAS1O95057 198 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 MLYCDO95822 493 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 THP07101 528 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CAPN1P07384 714 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CHRNB1P11230 501 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 MRPS15P82914 257 aaKnown RBP19.88■□□□□ 0.77
SHOX2-203ENST00000441443 FAM174BQ3ZCQ3 159 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CARD16Q5EG05 197 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 EFL1Q7Z2Z2 1120 aaKnown RBP19.88■□□□□ 0.77
SHOX2-203ENST00000441443 HIPK1Q86Z02 1210 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CHPFQ8IZ52 775 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 C10orf111Q8N326 155 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 DMRTB1Q96MA1 342 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 GPR21Q99679 349 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 FAM105AQ9NUU6 356 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 MED16Q9Y2X0 877 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 PDCD11Q14690 1871 aaKnown RBP19.88■□□□□ 0.77
SHOX2-203ENST00000441443 OR2A25A4D2G3 310 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 PDZK1P1A8MUH7 402 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CREG1O75629 220 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 B3GAT3O94766 335 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 HAPLN1P10915 354 aaPredicted RBP19.88■□□□□ 0.77
SHOX2-203ENST00000441443 ITGAMP11215 1152 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 KRT20P35900 424 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 PGFP49763 221 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 DAPP51397 102 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 E2F2Q14209 437 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 GALNT3Q14435 633 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 ATAD3CQ5T2N8 411 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 MARC1Q5VT66 337 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 FKBP9P1Q75LS8 142 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 SLC13A3Q8WWT9 602 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 DERL2Q9GZP9 239 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 CATSPERZQ9NTU4 200 aa19.88■□□□□ 0.77
SHOX2-203ENST00000441443 DCAF13Q9NV06 445 aaKnown RBP19.88■□□□□ 0.77
SHOX2-203ENST00000441443 FAM172BPA6NC97 362 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 AP3D1O14617 1153 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 ANKRD28O15084 1053 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 FGF10O15520 208 aaPredicted RBP19.87■□□□□ 0.77
SHOX2-203ENST00000441443 CNPP09543 421 aaKnown RBP19.87■□□□□ 0.77
SHOX2-203ENST00000441443 GADD45AP24522 165 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 HK3P52790 923 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 RAD51Q06609 339 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 C18orf21Q32NC0 220 aaPredicted RBP19.87■□□□□ 0.77
SHOX2-203ENST00000441443 RFX4Q33E94 735 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 MORN1Q5T089 497 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 AGAP6Q5VW22 663 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 KIAA1958Q8N8K9 716 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 OR7G1Q8NGA0 311 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 GTF2H4Q92759 462 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 AGAP4Q96P64 663 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 OR2B2Q9GZK3 357 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 HEBP1Q9NRV9 189 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 CD274Q9NZQ7 290 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 LOC100506127A0A0U1RQW1 187 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 MSH3P20585 1137 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 BRCC3P46736 316 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 PURAQ00577 322 aaKnown RBP19.87■□□□□ 0.77
SHOX2-203ENST00000441443 MAPKAPK3Q16644 382 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 SLX4IPQ5VYV7 408 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 MSRB3Q8IXL7 192 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 OR4L1Q8NH43 312 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 HMCESQ96FZ2 354 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 SYTL2Q9HCH5 934 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 SNX6Q9UNH7 406 aa19.87■□□□□ 0.77
SHOX2-203ENST00000441443 E9PAM4 449 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 ATXN1LP0C7T5 689 aaKnown RBP19.86■□□□□ 0.77
SHOX2-203ENST00000441443 RENBPP51606 427 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 CPZQ66K79 652 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 RTL3Q8N8U3 475 aaKnown RBP19.86■□□□□ 0.77
SHOX2-203ENST00000441443 ASCC1Q8N9N2 400 aaKnown RBP19.86■□□□□ 0.77
SHOX2-203ENST00000441443 OR6F1Q8NGZ6 308 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 SLC6A13Q9NSD5 602 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 TRMT13Q9NUP7 481 aaKnown RBP19.86■□□□□ 0.77
SHOX2-203ENST00000441443 C14orf119Q9NWQ9 140 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 ADPRHL2Q9NX46 363 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 TAS2R13Q9NYV9 303 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 CLDN24A6NM45 220 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 EIF3FO00303 357 aaPredicted RBP19.86■□□□□ 0.77
SHOX2-203ENST00000441443 E2F3O00716 465 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 HAT1O14929 419 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 DSCR3O14972 297 aa19.86■□□□□ 0.77
SHOX2-203ENST00000441443 KMOO15229 486 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms