RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PRSS44E7EML9 344 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 GOLGA8MH3BSY2 632 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 DYNC1I1O14576 645 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 INSIG1O15503 277 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 NKX2-8O15522 239 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 AQP9O43315 295 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 RFPL1O75677 317 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TMCC1O94876 653 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MT-CYBP00156 380 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CSF2P04141 144 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CD99P14209 185 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 POLR2EP19388 210 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TPSB2P20231 275 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MAT2AP31153 395 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 AKT2P31751 481 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 UGT1A3P35503 534 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 FDFT1P37268 417 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ETV5P41161 510 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MMP13P45452 471 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 STK19P49842 368 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 RENBPP51606 427 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MTM1Q13496 603 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 HLTFQ14527 1009 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 FASTKD3Q14CZ7 662 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MORF4L2Q15014 288 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 BRD3Q15059 726 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TPSAB1Q15661 275 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 UAP1Q16222 522 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 PARP6Q2NL67 630 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 DEFB133Q30KQ1 61 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 POM121L1PQ3SYA9 428 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 C14orf28Q4W4Y0 310 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 FNBP1LQ5T0N5 605 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MARC1Q5VT66 337 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 FBXW10Q5XX13 1052 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MBLAC2Q68D91 279 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC70Q6NSX1 233 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 KDELC1Q6UW63 502 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 UNC5AQ6ZN44 842 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ARHGEF18Q6ZSZ5 1173 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MICALCLQ6ZW33 695 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TMPRSS9Q7Z410 1059 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CAND1Q86VP6 1230 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF354CQ86Y25 554 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 PPIL6Q8IXY8 311 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SLC35F3Q8IY50 421 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MPP5Q8N3R9 675 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 EIF1ADQ8N9N8 165 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 KDM1BQ8NB78 822 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TMEM145Q8NBT3 493 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 BBOF1Q8ND07 529 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 OR6C4Q8NGE1 309 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SPATA22Q8NHS9 363 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 BTN2A2Q8WVV5 523 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 IMP4Q96G21 291 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 EXOC2Q96KP1 924 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 RPL10LQ96L21 214 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF599Q96NL3 588 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 FMO2Q99518 471 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 VAT1Q99536 393 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 GPN2Q9H9Y4 310 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 PLAC1Q9HBJ0 212 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 GP6Q9HCN6 339 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TNFRSF12AQ9NP84 129 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 EIF2B3Q9NR50 452 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 PIH1D1Q9NWS0 290 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ZNF446Q9NWS9 450 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 UBA2Q9UBT2 640 aaPredicted RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 ANAPC5Q9UJX4 755 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 VPS28Q9UK41 221 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 TRHDEQ9UKU6 1024 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SHOC2Q9UQ13 582 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 PCDHGA3Q9Y5H0 932 aa4.72□□□□□ -1.65
PTPN4-206ENST00000441089 SONP18583 2426 aaKnown RBP4.72□□□□□ -1.65
PTPN4-206ENST00000441089 DOCK4Q8N1I0 1966 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 HIVEP2P31629 2446 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 EDDM13A0A1B0GTR0 161 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 A6NNZ2 444 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 NUDT19A8MXV4 375 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 E7ESA3 106 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 LMO7DNF2Z398 122 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 PLRG1O43660 514 aaKnown RBP4.71□□□□□ -1.66
PTPN4-206ENST00000441089 AVILO75366 819 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 ZNF189O75820 626 aaPredicted RBP4.71□□□□□ -1.66
PTPN4-206ENST00000441089 STK10O94804 968 aaKnown RBP4.71□□□□□ -1.66
PTPN4-206ENST00000441089 SORBS2O94875 1100 aaKnown RBP4.71□□□□□ -1.66
PTPN4-206ENST00000441089 SUN1O94901 812 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 AP2A1O95782 977 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 AGTP01019 485 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 PRLP01236 227 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 ASLP04424 464 aa4.71□□□□□ -1.66
PTPN4-206ENST00000441089 RPLP0P05388 317 aaKnown RBP4.71□□□□□ -1.66
PTPN4-206ENST00000441089 TUBBP07437 444 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms