RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 POLR3BQ9NW08 1133 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD300AQ9UGN4 299 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ASB1Q9Y576 335 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 PCP4L1A6NKN8 68 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TNFRSF10BO14763 440 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ACOX3O15254 700 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 LDB2O43679 373 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ABCB7O75027 752 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 VIPP01282 170 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 PFKLP17858 780 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC6A4P31645 630 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SGSHP51688 502 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TRAF3Q13114 568 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 DGUOKQ16854 277 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM174BQ3ZCQ3 159 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ANKRD13BQ86YJ7 626 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC44A2Q8IWA5 706 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TBC1D21Q8IYX1 336 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 STON2Q8WXE9 905 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMG9Q9H0W8 520 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 NEK6Q9HC98 313 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 KLHL3Q9UH77 587 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CRLS1Q9UJA2 301 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 MTMR11A4FU01 709 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 BCKDKO14874 412 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC7A4O43246 635 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 NPHS1O60500 1241 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 MTX2O75431 263 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 MLYCDO95822 493 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TNFRSF1BP20333 461 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 IL12AP29459 219 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ADRA1AP35348 466 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SERPINB10P48595 397 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 IL2P60568 153 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 HSPA14Q0VDF9 509 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SERINC3Q13530 473 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 PPP2R2DQ66LE6 453 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SULT1C3Q6IMI6 304 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD300LGQ6UXG3 332 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 OR2T12Q8NG77 320 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 OR13F1Q8NGS4 319 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ASB8Q9H765 288 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CARS2Q9HA77 564 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 WWOXQ9NZC7 414 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TRPM5Q9NZQ8 1165 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ACTR3BQ9P1U1 418 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC45A1Q9Y2W3 748 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 GMPPBQ9Y5P6 360 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ASCC3Q8N3C0 2202 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 A0A096LPI6 279 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 C2orf78A6NCI8 922 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 NDST3O95803 873 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 FHP07954 510 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CCDC159P0C7I6 412 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 C21orf33P30042 268 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 S100A5P33763 92 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 HERVK_113P63132 956 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 MBOAT1Q6ZNC8 495 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 LARP4Q71RC2 724 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 P3H2Q8IVL5 708 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 ARL14EPQ8N8R7 260 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 ARRDC2Q8TBH0 407 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PYCR2Q96C36 320 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC47A1Q96FL8 570 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF347Q96SE7 839 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 ERVK-6Q9BXR3 956 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 SYTL2Q9HCH5 934 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD84Q9UIB8 345 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 OGDHLQ9ULD0 1010 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PADI4Q9UM07 663 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 SCML2Q9UQR0 700 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF99A8MXY4 864 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 C1QCP02747 245 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 GPIP06744 558 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CAPN1P07384 714 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PIM1P11309 404 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYBAP13498 195 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD1DP15813 335 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CRHBPP24387 322 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 LEPRP48357 1165 aaKnown RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 TGM4P49221 684 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 EMX1Q04741 257 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 HECTD3Q5T447 861 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 TXNDC8Q6A555 127 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 SDE2Q6IQ49 451 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYHR1Q6ZMK1 362 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CACUL1Q86Y37 369 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 BRSK1Q8TDC3 778 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 AMBRA1Q9C0C7 1298 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 CLPBQ9H078 707 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PAQR5Q9NXK6 330 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PCDHGA11Q9Y5H2 935 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 PCM1Q15154 2024 aa9.74□□□□□ -0.85
CDC42SE1-202ENST00000439374 TYW5A2RUC4 315 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 M0QZQ0 153 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ACSL4O60488 711 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms