RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 A0A087WUV0 522 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 IGHV5-10-1A0A0J9YXX1 117 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 FAM221BA6H8Z2 402 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 OR6C74A6NCV1 312 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 RIPK2O43353 540 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 C1orf105O95561 183 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 MPC1LP0DKB6 136 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 ZNF37AP17032 561 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 SHMT2P34897 504 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 SPRP35270 261 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 RGS4P49798 205 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 TAS2R39P59534 338 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 ERCC6LQ2NKX8 1250 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 IRGCQ6NXR0 463 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 TMEM71Q6P5X7 295 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 CCNI2Q6ZMN8 369 aaPredicted RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 AMIGO1Q86WK6 493 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 PLXDC1Q8IUK5 500 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 RCBTB1Q8NDN9 531 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.42■□□□□ 0.22
TARDBP-203ENST00000439080 TGM7Q96PF1 710 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 CAB39LQ9H9S4 337 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 KLHL3Q9UH77 587 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 SLC39A10Q9ULF5 831 aa16.42■□□□□ 0.22
TARDBP-203ENST00000439080 KRT87PA6NCN2 255 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 ARHGEF33A8MVX0 844 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 CAPN5O15484 640 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-203ENST00000439080 KDM1AO60341 852 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 PSIP1O75475 530 aaKnown RBP16.41■□□□□ 0.22
TARDBP-203ENST00000439080 TSPAN12O95859 305 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 ITGA2BP08514 1039 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 TPBGLP0DKB5 382 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 PKLRP30613 574 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 CCNFP41002 786 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 SLC12A2P55011 1212 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 POU4F1Q01851 419 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 GRB7Q14451 532 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 CCSMST1Q4G0I0 132 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 SNAP47Q5SQN1 464 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 TTC23LQ6PF05 361 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 CEP97Q8IW35 865 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 MYO1HQ8N1T3 1032 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 EEF1AKMT1Q8WVE0 214 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 LIN37Q96GY3 246 aaPredicted RBP16.41■□□□□ 0.22
TARDBP-203ENST00000439080 PAFAH2Q99487 392 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 MENTQ9BUN1 341 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 STRADBQ9C0K7 418 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 RAB33BQ9H082 229 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 HRASLS2Q9NWW9 162 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 MSRB2Q9Y3D2 182 aa16.41■□□□□ 0.22
TARDBP-203ENST00000439080 GSAPA4D1B5 854 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 TMX2-CTNND1H3BSU7 103 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 BTN3A3O00478 584 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 BTN3A1O00481 513 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 C9P02748 559 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 CATP04040 527 aaKnown RBP16.4■□□□□ 0.22
TARDBP-203ENST00000439080 POLR2CP19387 275 aaPredicted RBP16.4■□□□□ 0.22
TARDBP-203ENST00000439080 RAB28P51157 221 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 IL2P60568 153 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 PRKAA1Q13131 559 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 BMPR2Q13873 1038 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 USP10Q14694 798 aaKnown RBP16.4■□□□□ 0.22
TARDBP-203ENST00000439080 ARMC6Q6NXE6 501 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 WDR93Q6P2C0 686 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 CYHR1Q6ZMK1 362 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 FAM92BQ6ZTR7 304 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 MAGEC3Q8TD91 643 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 SLC44A1Q8WWI5 657 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 RAD51AP1Q96B01 352 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 TSPAN17Q96FV3 270 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 ZDHHC12Q96GR4 267 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 EPB41L4BQ9H329 900 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 POPDC3Q9HBV1 291 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 GPAMQ9HCL2 828 aa16.4■□□□□ 0.22
TARDBP-203ENST00000439080 EXOC1LA0A1B0GW35 172 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 AGRPO00253 132 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 MATN2O00339 956 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 RASGRF2O14827 1237 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 PHGDHO43175 533 aaKnown RBP16.39■□□□□ 0.21
TARDBP-203ENST00000439080 INHBAP08476 426 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 STMN1P16949 149 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 SP140Q13342 867 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 CAMK2BQ13554 666 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 TRA2AQ13595 282 aaKnown RBP eCLIP16.39■□□□□ 0.21
TARDBP-203ENST00000439080 C16orf72Q14CZ0 275 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 ZKSCAN8Q15776 578 aaPredicted RBP16.39■□□□□ 0.21
TARDBP-203ENST00000439080 C3orf38Q5JPI3 329 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 TMEM207Q6UWW9 146 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 UBE2R2Q712K3 238 aaPredicted RBP16.39■□□□□ 0.21
TARDBP-203ENST00000439080 ADGRF3Q8IZF5 1079 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 ASB11Q8WXH4 323 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 IL17FQ96PD4 163 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 RAB11FIP5Q9BXF6 653 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 OR6C2Q9NZP2 312 aa16.39■□□□□ 0.21
TARDBP-203ENST00000439080 PDP2Q9P2J9 529 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms