RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TTC4O95801 387 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 EBLN1P0CF75 366 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 PGAM1P18669 254 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 TUBB4BP68371 445 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 ABHD18Q0P651 414 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SRSF6Q13247 344 aaKnown RBP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 TUBB2AQ13885 445 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 KCNAB1Q14722 419 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 TTC23LQ6PF05 361 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 UNC5AQ6ZN44 842 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 CENPUQ71F23 418 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 LSM14AQ8ND56 463 aaKnown RBP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 OR8K5Q8NH50 307 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 CFAP61Q8NHU2 1237 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 GABPB2Q8TAK5 448 aaPredicted RBP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SKA2Q8WVK7 121 aaPredicted RBP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 ELMO2Q96JJ3 720 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 TUBB2BQ9BVA1 445 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 PITPNM3Q9BZ71 974 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 FANCEQ9HB96 536 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SYTL2Q9HCH5 934 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 C20orf96Q9NUD7 363 aaPredicted RBP23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 IL1RAPL1Q9NZN1 696 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 PCDHGA4Q9Y5G9 962 aa23.97■■□□□ 1.43
RAPGEF1-206ENST00000438647 SLC9B1P1A6NJY1 282 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 E5RI56 91 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 KIAA0754O94854 1291 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 PKMP14618 531 aaKnown RBP23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 CHRM3P20309 590 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 IVDP26440 423 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 ABRQ12979 859 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 SPESP1Q6UW49 350 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 TIPARPQ7Z3E1 657 aaKnown RBP23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 PDIK1LQ8N165 341 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 AGGF1Q8N302 714 aaeCLIP23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 FOPNLQ96NB1 174 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 FAM167BQ9BTA0 163 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 CCDC68Q9H2F9 335 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 LNPEPQ9UIQ6 1025 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 FAM169AQ9Y6X4 670 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 IGSF10Q6WRI0 2623 aa23.96■■□□□ 1.43
RAPGEF1-206ENST00000438647 FANCGO15287 622 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 NIPSNAP2O75323 286 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 MT-ND3P03897 115 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 LIFP15018 202 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 CASQ1P31415 396 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 RAB28P51157 221 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 ETF1P62495 437 aaKnown RBP23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 DHX9Q08211 1270 aaKnown RBP23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 C6orf15Q6UXA7 325 aaPredicted RBP23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 PPM1MQ96MI6 270 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 NRTNQ99748 197 aa23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 EBNA1BP2Q99848 306 aaKnown RBP23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 GPN2Q9H9Y4 310 aaPredicted RBP23.95■■□□□ 1.42
RAPGEF1-206ENST00000438647 EIF4E1BA6NMX2 242 aaKnown RBP23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 NDC80O14777 642 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 ATXN7O15265 892 aaPredicted RBP23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 TTI1O43156 1089 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 S1PR4O95977 384 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 CHRM5P08912 532 aaPredicted RBP23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 MSL3P1P0C860 447 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 ZNF28P17035 718 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 ATP5DP30049 168 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 CRYMQ14894 314 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 KIR2DS3Q14952 304 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 KYNUQ16719 465 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 SOWAHCQ53LP3 525 aaPredicted RBP23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 FBXO38Q6PIJ6 1188 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 DENND6AQ8IWF6 608 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 WBP1Q96G27 269 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 RAB11FIP5Q9BXF6 653 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 LATS2Q9NRM7 1088 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 COMMD10Q9Y6G5 202 aa23.94■■□□□ 1.42
RAPGEF1-206ENST00000438647 CCNYL3P0C7X3 344 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 ST6GAL1P15907 406 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 PKLRP30613 574 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 CCNFP41002 786 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 STAT5AP42229 794 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC1A2P43004 574 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 CTBP1Q13363 440 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 TTLL9Q3SXZ7 439 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 BBS9Q3SYG4 887 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 TAF1BQ53T94 588 aaPredicted RBP23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 HSP90AA5PQ58FG0 334 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 SPANXN3Q5MJ09 141 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 PWWP2BQ6NUJ5 590 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 KCNMB4Q86W47 210 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 RAB42Q8N4Z0 105 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 ZBTB2Q8N680 514 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 GALNT6Q8NCL4 622 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 MAGEC3Q8TD91 643 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 RAD51AP1Q96B01 352 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 ZNF501Q96CX3 271 aaPredicted RBP23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 SNF8Q96H20 258 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 TRAPPC9Q96Q05 1148 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 KRT12Q99456 494 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 TRIM51Q9BSJ1 452 aa23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 FBXO6Q9NRD1 293 aaPredicted RBP23.93■■□□□ 1.42
RAPGEF1-206ENST00000438647 SLC39A10Q9ULF5 831 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms