RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 TMEM121Q9BTD3 319 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 SLC7A5P2Q9GIP4 190 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 SPRTNQ9H040 489 aaPredicted RBP17.56■□□□□ 0.4
GTF3A-204ENST00000438571 LRRC40Q9H9A6 602 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 VPS37BQ9H9H4 285 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 VPS4AQ9UN37 437 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 CACNA1DQ01668 2161 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 HEATR5BQ9P2D3 2071 aa17.56■□□□□ 0.4
GTF3A-204ENST00000438571 CCDC162PA2VCL2 907 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 CNOT3O75175 753 aaKnown RBP17.55■□□□□ 0.4
GTF3A-204ENST00000438571 AP2A1O95782 977 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 FTCDO95954 541 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 MSNP26038 577 aaKnown RBP17.55■□□□□ 0.4
GTF3A-204ENST00000438571 ACADLP28330 430 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 OTX2P32243 289 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 RPA4Q13156 261 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SLC9A5Q14940 896 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SLC6A19Q695T7 634 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 GALNT11Q8NCW6 608 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 OR52K1Q8NGK4 314 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SLC35B2Q8TB61 432 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 LKAAEAR1Q8TD35 194 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 ELMO1Q92556 727 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SYTL2Q9HCH5 934 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SLC2A6Q9UGQ3 507 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SERTAD3Q9UJW9 196 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 ASF1AQ9Y294 204 aa17.55■□□□□ 0.4
GTF3A-204ENST00000438571 TDRKHQ9Y2W6 561 aaKnown RBP17.55■□□□□ 0.4
GTF3A-204ENST00000438571 SLC5A10A0PJK1 596 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 MROH6A6NGR9 719 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 BHMG1C9JSJ3 638 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 OR1I1O60431 355 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 SEMA7AO75326 666 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 KLF7O75840 302 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 CHRM5P08912 532 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 CSE1LP55060 971 aaKnown RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 MRPL49Q13405 166 aaKnown RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 JMJD6Q6NYC1 403 aaPredicted RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 PRUNE1Q86TP1 453 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 OR13J1Q8NGT2 312 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 ATG4AQ8WYN0 398 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 PPP1R2P1Q96PQ5 205 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 IMPACTQ9P2X3 320 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 DHCR7Q9UBM7 475 aaKnown RBP17.54■□□□□ 0.4
GTF3A-204ENST00000438571 CIDEBQ9UHD4 219 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 CDYLQ9Y232 598 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 ZNF451Q9Y4E5 1061 aa17.54■□□□□ 0.4
GTF3A-204ENST00000438571 LIN7AO14910 233 aaPredicted RBP17.53■□□□□ 0.4
GTF3A-204ENST00000438571 AP2A2O94973 939 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 PSMA3P25788 255 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 CETN2P41208 172 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 GRIA1P42261 906 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 NSG1P42857 185 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 SEMA3AQ14563 771 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 ITIH4Q14624 930 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 INPP5JQ15735 1006 aaPredicted RBP17.53■□□□□ 0.4
GTF3A-204ENST00000438571 MLIPQ5VWP3 458 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 PEX26Q7Z412 305 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 MRGPREQ86SM8 312 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 TMTC1Q8IUR5 882 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 TMEM139Q8IV31 216 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 GLIS1Q8NBF1 620 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 ZNF778Q96MU6 729 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 GBP5Q96PP8 586 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 GPR83Q9NYM4 423 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 AMFRQ9UKV5 643 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 KLHL20Q9Y2M5 609 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 ZGRF1Q86YA3 2104 aa17.53■□□□□ 0.4
GTF3A-204ENST00000438571 A0A0J9YY10 115 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 C9J4A7 227 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 OR2B3O76000 313 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 AGFG2O95081 481 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 GOT2P00505 430 aaKnown RBP17.52■□□□□ 0.4
GTF3A-204ENST00000438571 SHMT2P34897 504 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 P3H1Q32P28 736 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 PACS1Q6VY07 963 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 VRK3Q8IV63 474 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 TBC1D21Q8IYX1 336 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 ZNF655Q8N720 491 aaPredicted RBP17.52■□□□□ 0.4
GTF3A-204ENST00000438571 TMEM102Q8N9M5 508 aaPredicted RBP17.52■□□□□ 0.4
GTF3A-204ENST00000438571 OR5K2Q8NHB8 316 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 LRRC45Q96CN5 670 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 DESI2Q9BSY9 194 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 RBSNQ9H1K0 784 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 LRRC4CQ9HCJ2 640 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 PTRH2Q9Y3E5 179 aaKnown RBP17.52■□□□□ 0.4
GTF3A-204ENST00000438571 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.4
GTF3A-204ENST00000438571 PRRC2CQ9Y520 2896 aaKnown RBP17.52■□□□□ 0.39
GTF3A-204ENST00000438571 GOLGA6L9A6NEM1 432 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 TCP11X1B4DZS4 312 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 KRT86O43790 486 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 DPM1O60762 260 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 FTH1P02794 183 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
GTF3A-204ENST00000438571 AGXTP21549 392 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 KYNUQ16719 465 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 SYTL3Q4VX76 610 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 FHL5Q5TD97 284 aa17.51■□□□□ 0.39
GTF3A-204ENST00000438571 RHBDD2Q6NTF9 364 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms