RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TBC1D3BA6NDS4 549 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 C9JVG2 144 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 ADRB3P13945 408 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 SLC6A2P23975 617 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 RUNX3Q13761 415 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 SYTL3Q4VX76 610 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 IL23RQ5VWK5 629 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 CYP20A1Q6UW02 462 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 DSG4Q86SJ6 1040 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 ST13P5Q8NFI4 369 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-216ENST00000437340 TMEM159Q96B96 161 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 FBXL8Q96CD0 374 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 SLC39A3Q9BRY0 314 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 ASIC5Q9NY37 505 aa25.09■■□□□ 1.61
CPNE1-216ENST00000437340 ZNF490Q9ULM2 529 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-216ENST00000437340 EIF3LQ9Y262 564 aaKnown RBP25.09■■□□□ 1.61
CPNE1-216ENST00000437340 TMEM265A0A087WTH1 108 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 PRSS51A0A1B0GVH4 220 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 TSPAN6O43657 245 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 PSIP1O75475 530 aaKnown RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 STAMBPO95630 424 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 HSD17B1P14061 328 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 JAK1P23458 1154 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 IL12AP29459 219 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 OPRD1P41143 372 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 EIF2DP41214 584 aaKnown RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 METAP1P53582 386 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 CTSCP53634 463 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 TLR1Q15399 786 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 ZXDCQ2QGD7 858 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 TMEM52BQ4KMG9 183 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 RFTN2Q52LD8 501 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 ZNF648Q5T619 568 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 EP400NLQ6ZTU2 488 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 SLC15A3Q8IY34 581 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 SUSD6Q92537 303 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 DUS3LQ96G46 650 aaKnown RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 HBEGFQ99075 208 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 ZCCHC2Q9C0B9 1178 aaKnown RBP25.08■■□□□ 1.61
CPNE1-216ENST00000437340 PCDHAC1Q9H158 963 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 DYRK4Q9NR20 520 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 BATF3Q9NR55 127 aa25.08■■□□□ 1.61
CPNE1-216ENST00000437340 SLC5A10A0PJK1 596 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 ASPDHA6ND91 283 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 NME4O00746 187 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 FFAR3O14843 346 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 ANKRD28O15084 1053 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 GPR42O15529 346 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 G6PDP11413 515 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 GNPDA1P46926 289 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 RHDQ02161 417 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 DPTQ07507 201 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 NFYCQ13952 458 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 TRIP10Q15642 601 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 PTCHD3Q3KNS1 767 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 C6orf10Q5SRN2 563 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 OGFRL1Q5TC84 451 aaPredicted RBP25.08■■□□□ 1.6
CPNE1-216ENST00000437340 PRR23BQ6ZRT6 265 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 DPP10Q8N608 796 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 L3MBTL4Q8NA19 623 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 VPS33AQ96AX1 596 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 NUS1Q96E22 293 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 LRCH3Q96II8 777 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 DNAJC11Q9NVH1 559 aa25.08■■□□□ 1.6
CPNE1-216ENST00000437340 THAP10Q9P2Z0 257 aaPredicted RBP25.08■■□□□ 1.6
CPNE1-216ENST00000437340 CNOT6Q9ULM6 557 aaKnown RBP25.08■■□□□ 1.6
CPNE1-216ENST00000437340 RECQL5O94762 991 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-216ENST00000437340 SOD1P00441 154 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 SLC2A4P14672 509 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 LTBRP36941 435 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 MLLT1Q03111 559 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-216ENST00000437340 BNIP2Q12982 314 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 BCL7AQ4VC05 210 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 ATAT1Q5SQI0 421 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 ACTL8Q9H568 366 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 IL1RL2Q9HB29 575 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 SNX6Q9UNH7 406 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 POLR3HQ9Y535 204 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-216ENST00000437340 PCDHA9Q9Y5H5 950 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 KIAA1549LQ6ZVL6 1849 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 XIRP2A4UGR9 3374 aa25.07■■□□□ 1.6
CPNE1-216ENST00000437340 TMEM202A6NGA9 273 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 C1QTNF3-AMACRE9PGA6 284 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 ARNTLO00327 626 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 SOX1O00570 391 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-216ENST00000437340 PCSK2P16519 638 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 MAP4P27816 1152 aaKnown RBP25.06■■□□□ 1.6
CPNE1-216ENST00000437340 GJA4P35212 333 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 IMPG1Q17R60 797 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 IRAK1BP1Q5VVH5 260 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 CES5AQ6NT32 575 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 TMEM220Q6QAJ8 160 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 ERN2Q76MJ5 926 aaKnown RBP25.06■■□□□ 1.6
CPNE1-216ENST00000437340 PDSS2Q86YH6 399 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 ATL1Q8WXF7 558 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 ZUFSPQ96AP4 578 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 LRGUKQ96M69 825 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 HDAC8Q9BY41 377 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 CMTM6Q9NX76 183 aa25.06■■□□□ 1.6
CPNE1-216ENST00000437340 SPTBN5Q9NRC6 3674 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms