RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 WDFY2Q96P53 400 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 SEMA3CQ99985 751 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 NUDT16L1Q9BRJ7 211 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAK16Q9BXY0 300 aaKnown RBP2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 LAT2Q9GZY6 243 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 SMARCAD1Q9H4L7 1026 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 TBC1D29Q9UFV1 150 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 TRAPPC8Q9Y2L5 1435 aa2.76□□□□□ -1.97
HMGB1P31-201ENST00000437242 RNF17Q9BXT8 1623 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 REREQ9P2R6 1566 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 SETBP1Q9Y6X0 1596 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ABCC1P33527 1531 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF197O14709 1029 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 AP2A2O94973 939 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 KCNK5O95279 499 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 SRPRAP08240 638 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 CEACAM8P31997 349 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 HADHAP40939 763 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 GARSP41250 739 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PIK3CAP42336 1068 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 TAS2R40P59535 323 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 SP3Q02447 781 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 CHAF1BQ13112 559 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 MFAP5Q13361 173 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAPSNQ13702 412 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 NAB2Q15742 525 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ASTE1Q2TB18 679 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 CDONQ4KMG0 1287 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAB6CQ53S08 254 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 RILPL1Q5EBL4 403 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ACSM2BQ68CK6 577 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 CHST9Q7L1S5 443 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 SZRD1Q7Z422 152 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 TSPAN33Q86UF1 283 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PTOV1Q86YD1 416 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLD3Q8IV08 490 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 AFAP1Q8N556 730 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 EMC1Q8N766 993 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMEM178AQ8NBL3 297 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 TRPC4APQ8TEL6 797 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 SNRNP27Q8WVK2 155 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAGED4Q96JG8 741 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 GPATCH1Q9BRR8 931 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAB6CQ9H0N0 254 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 P2RY12Q9H244 342 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAGIXQ9H6Y5 334 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PELI2Q9HAT8 420 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 COPG2Q9UBF2 871 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 CNOT8Q9UFF9 292 aaKnown RBP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 FBXW11Q9UKB1 542 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 TMEM5Q9Y2B1 443 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 YIPF1Q9Y548 306 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PRXQ9BXM0 1461 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 IQGAP1P46940 1657 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ADGBQ8N7X0 1667 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 ROBO1Q9Y6N7 1651 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PTPRKQ15262 1439 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRP6O75581 1613 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PREX2Q70Z35 1606 aa2.75□□□□□ -1.97
HMGB1P31-201ENST00000437242 PLXNC1O60486 1568 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SAMD9LQ8IVG5 1584 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PASKQ96RG2 1323 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRRC7Q96NW7 1537 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 GOLGA3Q08378 1498 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 MAGI2Q86UL8 1455 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SHANK2Q9UPX8 1470 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 KANSL1LA0AUZ9 987 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 HS6ST1O60243 411 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 DUS4LO95620 317 aaKnown RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 HIST1H2ABP04908 130 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 RB1P06400 928 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PORP16435 677 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 GABRB1P18505 474 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 HIST1H2ADP20671 130 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PRCPP42785 496 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PTGER3P43115 390 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 MS4A2Q01362 244 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 PNLIPRP3Q17RR3 467 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZSCAN23Q3MJ62 389 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 GLIPR1L2Q4G1C9 344 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 FASTKD1Q53R41 847 aaKnown RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 C2CD6Q53TS8 623 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 RAB41Q5JT25 222 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 NSUN5P2Q63ZY6 315 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 HIST3H2AQ7L7L0 130 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 LRRTM1Q86UE6 522 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF843Q8N446 348 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SMPDL3BQ92485 455 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SEMA4DQ92854 862 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 OMA1Q96E52 524 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 OR2A14Q96R47 310 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 FTOQ9C0B1 505 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 FBXL17Q9UF56 701 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 ZNF215Q9UL58 517 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 EXO1Q9UQ84 846 aaKnown RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 TTLL3Q9Y4R7 772 aa2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 KLF2Q9Y5W3 355 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P31-201ENST00000437242 SNX8Q9Y5X2 465 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms