RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ARCN1P48444 511 aaKnown RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ALDH3A2P51648 485 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 MAPK12P53778 367 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 RELQ04864 619 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 KIR2DS5Q14953 304 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 MORF4L2Q15014 288 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 E2F5Q15329 346 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 FAM174BQ3ZCQ3 159 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 TTC31Q49AM3 519 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 NHSL2Q5HYW2 709 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ELFN2Q5R3F8 820 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 MPP7Q5T2T1 576 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 FAM171BQ6P995 826 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 LINGO4Q6UY18 593 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 RAPH1Q70E73 1250 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ATG9AQ7Z3C6 839 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 EXOC3L1Q86VI1 746 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 HOOK3Q86VS8 718 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 TMEM219Q86XT9 240 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 FAM114A1Q8IWE2 563 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ODF3L1Q8IXM7 274 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 OTUD6BQ8N6M0 293 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ZFAND2BQ8WV99 257 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 LINGO1Q96FE5 620 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 OTUB1Q96FW1 271 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 THOC3Q96J01 351 aaKnown RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 MUS81Q96NY9 551 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 PCYT2Q99447 389 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 GKN1Q9NS71 199 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ABCB8Q9NUT2 735 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 RNF7Q9UBF6 113 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 ITGA11Q9UKX5 1188 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 MTUS1Q9ULD2 1270 aa4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRIP12Q14669 1992 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P45-201ENST00000435986 CGNL1Q0VF96 1302 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A0U1RQK1 487 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A1W2PPW3 197 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 ASPDHA6ND91 283 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TRIM64CA6NLI5 447 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 ENO4A6NNW6 628 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 H0YAE9 185 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 PTGESO14684 152 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 RNASEH1O60930 286 aaKnown RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TOMM70O94826 608 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 CAVIN2O95810 425 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 IGHV2-70P01814 119 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 C9P02748 559 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 PTPN3P26045 913 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 HOXA11P31270 313 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 KIF5BP33176 963 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TDO2P48775 406 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 MMP15P51511 669 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 KRTAP1-1Q07627 177 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TROAPQ12815 778 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 MFAP5Q13361 173 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 PPP2R5CQ13362 524 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLMAPQ14BN4 828 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TAF13Q15543 124 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 CDO1Q16878 200 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SMU1Q2TAY7 513 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 CASC4Q6P4E1 433 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 IYDQ6PHW0 289 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 GFRALQ6UXV0 394 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 ERC1Q8IUD2 1116 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SPATA2LQ8IUW3 424 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 CPSF7Q8N684 471 aaKnown RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC26A7Q8TE54 656 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 RNF128Q8TEB7 428 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 GRK7Q8WTQ7 553 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 VOPP1Q96AW1 172 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 DHX58Q96C10 678 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 THOC1Q96FV9 657 aaKnown RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 MED30Q96HR3 178 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 POLR3CQ9BUI4 534 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 KATNB1Q9BVA0 655 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 TCF7L2Q9NQB0 619 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SERINC1Q9NRX5 453 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 ECHDC1Q9NTX5 307 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC38A7Q9NVC3 462 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 LIPT1Q9Y234 373 aa4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P45-201ENST00000435986 SYNRGQ9UMZ2 1314 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 A0A1W2PS18 150 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 TMEM221A6NGB7 291 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 ZNF263O14978 683 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 SLC7A4O43246 635 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 AP5Z1O43299 807 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 LDB3O75112 727 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 RPS6KA5O75582 802 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 RLN1P04808 185 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 TPM2P07951 284 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 IRF2P14316 349 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 ZNF12P17014 697 aa4.29□□□□□ -1.72
HMGB1P45-201ENST00000435986 ITGA2P17301 1181 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms