RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PTCHD3Q3KNS1 767 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
EDEM1-202ENST00000434243 PCID2Q5JVF3 399 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 IZUMO3Q5VZ72 239 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 LCN10Q6JVE6 187 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 TCTN3Q6NUS6 607 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 CDHR3Q6ZTQ4 885 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 LDB1Q86U70 411 aaPredicted RBP12.89□□□□□ -0.35
EDEM1-202ENST00000434243 DSELQ8IZU8 1212 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 OTUD6BQ8N6M0 293 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 ENDOVQ8N8Q3 282 aaKnown RBP12.89□□□□□ -0.35
EDEM1-202ENST00000434243 OR5K2Q8NHB8 316 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 LRFN5Q96NI6 719 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 PITPNM3Q9BZ71 974 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 CATSPERZQ9NTU4 200 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 PCMTD2Q9NV79 361 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF749O43361 778 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 CEP104O60308 925 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 FGGP02679 453 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 CCR7P32248 378 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 KCNJ1P48048 391 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 CRADDP78560 199 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 SEMA3AQ14563 771 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 IGFBP7Q16270 282 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 FAM69BQ5VUD6 431 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 CPZQ66K79 652 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF534Q76KX8 674 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 APLFQ8IW19 511 aaPredicted RBP12.88□□□□□ -0.35
EDEM1-202ENST00000434243 SYTL1Q8IYJ3 562 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 KRT222Q8N1A0 295 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 C19orf47Q8N9M1 422 aaKnown RBP12.88□□□□□ -0.35
EDEM1-202ENST00000434243 GSDMBQ8TAX9 411 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 MAIP1Q8WWC4 291 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 TCTN2Q96GX1 697 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 OR2A14Q96R47 310 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 ING2Q9H160 280 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 FAM60AQ9NP50 221 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 SPHK1Q9NYA1 384 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 OR6C2Q9NZP2 312 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 CIDEBQ9UHD4 219 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 TCFL5Q9UL49 500 aa12.88□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF106Q9H2Y7 1883 aaKnown RBP12.88□□□□□ -0.35
EDEM1-202ENST00000434243 A0A0J9YY10 115 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 C9J4A7 227 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 CD3EAPO15446 510 aaKnown RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 NDUFS3O75489 264 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 OR2B3O76000 313 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 APOA4P06727 396 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 HBQ1P09105 142 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 TPBGLP0DKB5 382 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 RORAP35398 523 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 ACVR1Q04771 509 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 TMED2Q15363 201 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 SIX1Q15475 284 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 KCTD19Q17RG1 926 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF789Q5FWF6 425 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 MLIPQ5VWP3 458 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 ZNF517Q6ZMY9 492 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 VRK3Q8IV63 474 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 C2orf73Q8N5S3 287 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 LKAAEAR1Q8TD35 194 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 SKA2Q8WVK7 121 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 ASZ1Q8WWH4 475 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 SLC25A23Q9BV35 468 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 CARD6Q9BX69 1037 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 NLNQ9BYT8 704 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 SPRTNQ9H040 489 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 BFARQ9NZS9 450 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 DRG1Q9Y295 367 aaKnown RBP12.87□□□□□ -0.35
EDEM1-202ENST00000434243 ATMQ13315 3056 aa12.87□□□□□ -0.35
EDEM1-202ENST00000434243 AP3B1O00203 1094 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 RPN2P04844 631 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 MSL3P1P0C860 447 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 NMBRP28336 390 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 CXCR5P32302 372 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 PTGIRP43119 386 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 NPY2RP49146 381 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TTPAP49638 278 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 PGDP52209 483 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 KIR2DS3Q14952 304 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TRIP13Q15645 432 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 ZIC1Q15915 447 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TTC23LQ6PF05 361 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
EDEM1-202ENST00000434243 CES3Q6UWW8 571 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 C4orf22Q6V702 233 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 TAX1BP1Q86VP1 789 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 SLC22A15Q8IZD6 547 aa12.86□□□□□ -0.35
EDEM1-202ENST00000434243 LMNTD1Q8N9Z9 388 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms