RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 RAB33AQ14088 237 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 GPRC6AQ5T6X5 926 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 PRAMEF9Q5VWM5 478 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 WASH2PQ6VEQ5 465 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 ADGRD2Q7Z7M1 963 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 C7orf61Q8IZ16 206 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 ZBTB2Q8N680 514 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 BTBD9Q96Q07 612 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 CARS2Q9HA77 564 aaKnown RBP8.19□□□□□ -1.1
CD44-208ENST00000428726 C5AR2Q9P296 337 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 HSFX1Q9UBD0 423 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 LIMD1Q9UGP4 676 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 TBX21Q9UL17 535 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 VPS9D1Q9Y2B5 631 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 ZNF451Q9Y4E5 1061 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 GPR45Q9Y5Y3 372 aa8.19□□□□□ -1.1
CD44-208ENST00000428726 OAS3Q9Y6K5 1087 aaKnown RBP8.19□□□□□ -1.1
CD44-208ENST00000428726 PRAMEF33A0A0G2JMD5 474 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 DHRS12A0PJE2 317 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PFDN6O15212 129 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 TSPAN6O43657 245 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 MMP20O60882 483 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PDYNP01213 254 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 CTSLP07711 333 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 CEBPBP17676 345 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PTNP21246 168 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 MAT2AP31153 395 aaKnown RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 ACADVLP49748 655 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ATP6V0D1P61421 351 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 DBPQ10586 325 aaPredicted RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 SLC14A1Q13336 389 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 NAE1Q13564 534 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 SPIDRQ14159 915 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 KANK2Q63ZY3 851 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 C22orf39Q6P5X5 142 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 CNKSR3Q6P9H4 555 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 MMP21Q8N119 569 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 TMEM102Q8N9M5 508 aaPredicted RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 CATSPER1Q8NEC5 780 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 OR7A2PQ8NGA2 310 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 FAM81AQ8TBF8 368 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 APIPQ96GX9 242 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 COPS8Q99627 209 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 FAM192AQ9GZU8 254 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ACTL8Q9H568 366 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 GPRC5BQ9NZH0 403 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PCYT1BQ9Y5K3 369 aaPredicted RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 BACE2Q9Y5Z0 518 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ULK1O75385 1050 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ZNF682O95780 498 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 GNRH1P01148 92 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ASLP04424 464 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 SERPIND1P05546 499 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 HNRNPCP07910 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
CD44-208ENST00000428726 FAM58BPP0C7Q3 252 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PABPC4LP0CB38 370 aaKnown RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 PSMA3P25788 255 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 NEDD8Q15843 81 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 LDLRAP1Q5SW96 308 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 GLYATQ6IB77 296 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 OR4F3Q6IEY1 312 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 STK32CQ86UX6 486 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 C11orf74Q86VG3 221 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 TRAPPC5Q8IUR0 188 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 NKAPQ8N5F7 415 aaKnown RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 PCYOX1LQ8NBM8 494 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ZNF740Q8NDX6 193 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 MAL2Q969L2 176 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 ASB9Q96DX5 294 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 TDP1Q9NUW8 608 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 SUCOQ9UBS9 1254 aaKnown RBP8.18□□□□□ -1.1
CD44-208ENST00000428726 EBF1Q9UH73 591 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
CD44-208ENST00000428726 MYO1GB0I1T2 1018 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 GSTA4O15217 222 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 OPN1SWP03999 348 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 C1SP09871 688 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 TCF3P15923 654 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PBX2P40425 430 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PTGER3P43115 390 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 RPL5P46777 297 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 SEC13P55735 322 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 NAA20P61599 178 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 GTF2H3Q13889 308 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 NEK5Q6P3R8 708 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 GET4Q7L5D6 327 aaPredicted RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 SZRD1Q7Z422 152 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 MMAAQ8IVH4 418 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 CFAP206Q8IYR0 622 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 CLECL1Q8IZS7 167 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 OR2A12Q8NGT7 310 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.1
CD44-208ENST00000428726 DGCR14Q96DF8 476 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 RSPRY1Q96DX4 576 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 FAM126AQ9BYI3 521 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms