RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 GNG11P61952 73 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 DHX34Q14147 1143 aaKnown RBP20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ANKRD22Q5VYY1 191 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ARMC3Q5W041 872 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ZNF605Q86T29 641 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ADGRF3Q8IZF5 1079 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 STARD8Q92502 1023 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ZNF669Q96BR6 464 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-205ENST00000427897 CLIP3Q96DZ5 547 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 FOPNLQ96NB1 174 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 KLHL25Q9H0H3 589 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 OR6C2Q9NZP2 312 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ASIC3Q9UHC3 531 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 IL17BQ9UHF5 180 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 SLC39A10Q9ULF5 831 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 PLAGL1Q9UM63 463 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 BTRCQ9Y297 605 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 VPS9D1Q9Y2B5 631 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 MRFAP1Q9Y605 127 aa20.02■□□□□ 0.8
HSPG2-205ENST00000427897 ZFYVE26Q68DK2 2539 aa20.02■□□□□ 0.79
HSPG2-205ENST00000427897 CTAGE9A4FU28 777 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 E5RI56 91 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 H3BMM5 538 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CPNE3O75131 537 aaKnown RBP20.01■□□□□ 0.79
HSPG2-205ENST00000427897 TIAF1O95411 115 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CHRM5P08912 532 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-205ENST00000427897 ST6GAL1P15907 406 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CHRM3P20309 590 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CYP2A7P20853 494 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 AOAHP28039 575 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 MAGEA6P43360 314 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CCR10P46092 362 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 LINC00303Q3SY05 128 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 KIAA0930Q6ICG6 404 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-205ENST00000427897 SPESP1Q6UW49 350 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CAND1Q86VP6 1230 aaKnown RBP20.01■□□□□ 0.79
HSPG2-205ENST00000427897 PPIL6Q8IXY8 311 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 ZNF843Q8N446 348 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 RAB42Q8N4Z0 105 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 MCUQ8NE86 351 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 LKAAEAR1Q8TD35 194 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 ZNF501Q96CX3 271 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-205ENST00000427897 TRAPPC9Q96Q05 1148 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 NRTNQ99748 197 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 LHX9Q9NQ69 397 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 CRYL1Q9Y2S2 319 aa20.01■□□□□ 0.79
HSPG2-205ENST00000427897 IGSF10Q6WRI0 2623 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 TMEM150CB9EJG8 249 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 GPC4O75487 556 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 FAM87AP0C7U9 286 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 RPS3P23396 243 aaKnown RBP eCLIP20■□□□□ 0.79
HSPG2-205ENST00000427897 RPS15P62841 145 aaKnown RBP20■□□□□ 0.79
HSPG2-205ENST00000427897 NEPROQ6NW34 567 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 UNC5DQ6UXZ4 953 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 PCGF5Q86SE9 256 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 VRK3Q8IV63 474 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 GPR135Q8IZ08 494 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 MR1Q95460 341 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 CAPZA3Q96KX2 299 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 P2RY12Q9H244 342 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 CCDC68Q9H2F9 335 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 IRAK4Q9NWZ3 460 aa20■□□□□ 0.79
HSPG2-205ENST00000427897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20■□□□□ 0.79
HSPG2-205ENST00000427897 MRPS18BQ9Y676 258 aaKnown RBP20■□□□□ 0.79
HSPG2-205ENST00000427897 LOC400499M0QZD8 3231 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 FAM237BA0A1B0GVD1 139 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 TMEM63AO94886 807 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 SLCO2B1O94956 709 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 PVRP15151 417 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 UGT2B7P16662 529 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 OGNP20774 298 aaKnown RBP19.99■□□□□ 0.79
HSPG2-205ENST00000427897 CDC20Q12834 499 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 DNASE1L3Q13609 305 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 ERV3-1Q14264 604 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 DEFB109BQ30KR1 87 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 ANKRD20A4Q4UJ75 823 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 PLEKHS1Q5SXH7 462 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 DCUN1D3Q8IWE4 304 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 EXD3Q8N9H8 876 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 MAGEC3Q8TD91 643 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 SLC22A18Q96BI1 424 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 TCTN2Q96GX1 697 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 SERPINB12Q96P63 405 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 FAM117AQ9C073 453 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 SEMA4CQ9C0C4 833 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 DDX47Q9H0S4 455 aaKnown RBP19.99■□□□□ 0.79
HSPG2-205ENST00000427897 LATS2Q9NRM7 1088 aa19.99■□□□□ 0.79
HSPG2-205ENST00000427897 TSR3Q9UJK0 312 aaKnown RBP19.99■□□□□ 0.79
HSPG2-205ENST00000427897 HEMK1Q9Y5R4 338 aaPredicted RBP19.99■□□□□ 0.79
HSPG2-205ENST00000427897 C21orf140B9A014 251 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 C1QL1O75973 258 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 ESR1P03372 595 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 PAFAH1B1P43034 410 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 RAB28P51157 221 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 ITGA1P56199 1179 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 NFATC3Q12968 1075 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 KIR2DS3Q14952 304 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 TRIM73Q86UV7 250 aa19.98■□□□□ 0.79
HSPG2-205ENST00000427897 C2orf73Q8N5S3 287 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-205ENST00000427897 C19orf47Q8N9M1 422 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms