RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 VANGL1Q8TAA9 524 aaPredicted RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 CDH7Q9ULB5 785 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 MYH8P13535 1937 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 A0A087WXM4 84 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 OR6B1O95007 311 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 SUOXP51687 545 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 NTHL1P78549 312 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 PAOXQ6QHF9 649 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 PRSS58Q8IYP2 241 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 DEFB119Q8N690 84 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 FIBINQ8TAL6 211 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 RASSF5Q8WWW0 418 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 CENPIQ92674 756 aaPredicted RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 RGMAQ96B86 450 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 ROPN1LQ96C74 230 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 PGAP3Q96FM1 320 aaPredicted RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 ZFRQ96KR1 1074 aaKnown RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 GAL3ST4Q96RP7 486 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 MCOLN1Q9GZU1 580 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 PPIEQ9UNP9 301 aaKnown RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 PIAS3Q9Y6X2 628 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 ANPEPP15144 967 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 KLF1Q13351 362 aaPredicted RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
RPL28-202ENST00000426763 TMEM130Q8N3G9 435 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 TRAM1L1Q8N609 369 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 KCNJ9Q92806 393 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 VPS29Q9UBQ0 182 aa13.6□□□□□ -0.23
RPL28-202ENST00000426763 KRT36O76013 467 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ERVK-8P63133 956 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 INAQ16352 499 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 FAM26DQ5JW98 314 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 FGD2Q7Z6J4 655 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 CMTM7Q96FZ5 175 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ADAM7Q9H2U9 754 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ACSL5Q9ULC5 683 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 TTC34A8MYJ7 566 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 OAS1P00973 400 aaKnown RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 PRKCHP24723 683 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 LGALS3BPQ08380 585 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 NEDD8Q15843 81 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 PLEKHS1Q5SXH7 462 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 PIK3C3Q8NEB9 887 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 DNAJB8Q8NHS0 232 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 GRIP2Q9C0E4 1043 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 SLC22A14Q9Y267 594 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ENTPD5O75356 428 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 WFS1O76024 890 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 AGXTP21549 392 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 NTSR1P30989 418 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 LIPEQ05469 1076 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 NEK5Q6P3R8 708 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 LENG8Q96PV6 779 aaPredicted RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 DUSP26Q9BV47 211 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 PRRG4Q9BZD6 226 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 POPDC3Q9HBV1 291 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 KLHL1Q9NR64 748 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 CAB39Q9Y376 341 aaPredicted RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 PCDHB11Q9Y5F2 797 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 CDC7O00311 574 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 SIX3O95343 332 aaPredicted RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 EDN1P05305 212 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 ETV3P41162 512 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 AMIGO2Q86SJ2 522 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 SLC13A3Q8WWT9 602 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 SLC35G5Q96KT7 338 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 MRGPRX2Q96LB1 330 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 FBRSQ9HAH7 460 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 GDE1Q9NZC3 331 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 CNOT6Q9ULM6 557 aaKnown RBP13.59□□□□□ -0.23
RPL28-202ENST00000426763 CA14Q9ULX7 337 aa13.59□□□□□ -0.23
RPL28-202ENST00000426763 A0A0J9YVX5 310 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 AGPSO00116 658 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 PAK4O96013 591 aaPredicted RBP13.58□□□□□ -0.23
RPL28-202ENST00000426763 CHRNGP07510 517 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 RGS8P57771 180 aaPredicted RBP13.58□□□□□ -0.23
RPL28-202ENST00000426763 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 FRG2Q64ET8 278 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.23
RPL28-202ENST00000426763 CDK15Q96Q40 435 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 FRG2BQ96QU4 278 aa13.58□□□□□ -0.23
RPL28-202ENST00000426763 DDX28Q9NUL7 540 aaKnown RBP13.58□□□□□ -0.23
RPL28-202ENST00000426763 C9J4A7 227 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 RNGTTO60942 597 aaKnown RBP13.58□□□□□ -0.24
RPL28-202ENST00000426763 CREB1P16220 341 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 ELOCQ15369 112 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 SPIN4Q56A73 249 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 ANKRD46Q86W74 232 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 NATD1Q8N6N6 113 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 OR4E2Q8NGC2 313 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 DGKBQ9Y6T7 804 aa13.58□□□□□ -0.24
RPL28-202ENST00000426763 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms