RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZNF549Q6P9A3 640 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 UNC5AQ6ZN44 842 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 HOOK3Q86VS8 718 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 LRRC6Q86X45 466 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 TBC1D21Q8IYX1 336 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 SIDT2Q8NBJ9 832 aaKnown RBP13.21□□□□□ -0.29
SNX3-204ENST00000426155 ASZ1Q8WWH4 475 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 UBXN4Q92575 508 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 TEFMQ96QE5 360 aaKnown RBP13.21□□□□□ -0.29
SNX3-204ENST00000426155 PANX3Q96QZ0 392 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 CD180Q99467 661 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 SLC30A3Q99726 388 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 PLAC1Q9HBJ0 212 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 ACTR10Q9NZ32 417 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 PCDHB11Q9Y5F2 797 aa13.21□□□□□ -0.29
SNX3-204ENST00000426155 MAGEB16A2A368 324 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 F8W8V4 182 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 K7ENP7 123 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 TP73O15350 636 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 KIAA0754O94854 1291 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 DLGAP3O95886 979 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 S1PR4O95977 384 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 LIFP15018 202 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 PGAM1P18669 254 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 CDH3P22223 829 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 PRDX3P30048 256 aaKnown RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 ARL4DP49703 201 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 ETF1P62495 437 aaKnown RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 CYP4F2P78329 520 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 PLOD1Q02809 727 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 THOC5Q13769 683 aaKnown RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 COL9A2Q14055 689 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 CCSMST1Q4G0I0 132 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 HIBCHQ6NVY1 386 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 CNSTQ6PJW8 725 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 OTOAQ7RTW8 1153 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 TAX1BP1Q86VP1 789 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 KCNMB4Q86W47 210 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 RASGRP3Q8IV61 690 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 C2orf73Q8N5S3 287 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 IL22RA1Q8N6P7 574 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNX3-204ENST00000426155 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 SKA2Q8WVK7 121 aaPredicted RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 MENTQ9BUN1 341 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
SNX3-204ENST00000426155 SOHLH2Q9NX45 425 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 CHMP2BQ9UQN3 213 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 MED16Q9Y2X0 877 aa13.2□□□□□ -0.3
SNX3-204ENST00000426155 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 LOC101059948A0A1B0GTJ6 334 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PIPSLA2A3N6 862 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 EFCAB8A8MWE9 144 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SNPHO15079 494 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ZBTB11O95625 1053 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ESR1P03372 595 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 CHRM5P08912 532 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 FGF5P12034 268 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PKMP14618 531 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 UGT2B7P16662 529 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 CHRM3P20309 590 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PKLRP30613 574 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SHMT2P34897 504 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 ELK3P41970 407 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ATP1A2P50993 1020 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 HSD11B2P80365 405 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 CUL1Q13616 776 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 DNAJC21Q5F1R6 531 aaKnown RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 ACSBG2Q5FVE4 666 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PWWP2BQ6NUJ5 590 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SPESP1Q6UW49 350 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 PCSK4Q6UW60 755 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SYDE1Q6ZW31 735 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 PPP1R3BQ86XI6 285 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 NLGN4XQ8N0W4 816 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 D2HGDHQ8N465 521 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 LINC01555Q8NAE3 123 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 GALNT6Q8NCL4 622 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SPATA4Q8NEY3 305 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 NLGN4YQ8NFZ3 816 aaPredicted RBP13.19□□□□□ -0.3
SNX3-204ENST00000426155 FLVCR1-AS1Q8TAF5 88 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
SNX3-204ENST00000426155 SNF8Q96H20 258 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms