RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 MGAT1P26572 445 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 PTPN4P29074 926 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 CCR7P32248 378 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 TERF1P54274 439 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 ITGA1P56199 1179 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 GPS2Q13227 327 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 SEMA3AQ14563 771 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 TRIP13Q15645 432 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 TPSAB1Q15661 275 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 MRNIPQ6NTE8 343 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 SDCCAG8Q86SQ7 713 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 SYVN1Q86TM6 617 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 LDB1Q86U70 411 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 LRRC6Q86X45 466 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 SLC22A15Q8IZD6 547 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 C19orf47Q8N9M1 422 aaKnown RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 CFAP61Q8NHU2 1237 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 SKA2Q8WVK7 121 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 LRFN5Q96NI6 719 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 TRAPPC9Q96Q05 1148 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 NAP1L3Q99457 506 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 NRTNQ99748 197 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 ACTR5Q9H9F9 607 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-207ENST00000425049 IRAK4Q9NWZ3 460 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 PLAGL1Q9UM63 463 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
SHANK2-207ENST00000425049 A0A0J9YY10 115 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 ISM1B1AKI9 464 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 MKRN2OSH3BPM6 223 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 KPNA5O15131 536 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 RFPL1O75677 317 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 RECKO95980 971 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 HBQ1P09105 142 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 ABRQ12979 859 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 GPS1Q13098 491 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 LACTB2Q53H82 288 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 RNF187Q5TA31 235 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 LRRC8BQ6P9F7 803 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 FAM199XQ6PEV8 388 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 TTC23LQ6PF05 361 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 TRIM73Q86UV7 250 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 PTRH1Q86Y79 214 aaKnown RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 DCUN1D3Q8IWE4 304 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 PRELID2Q8N945 189 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 OR1L3Q8NH93 324 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 MAGOHBQ96A72 148 aaKnown RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 TCTN2Q96GX1 697 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 PBKQ96KB5 322 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 AP1M1Q9BXS5 423 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 CHST8Q9H2A9 424 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 MRM3Q9HC36 420 aaKnown RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 ZNF71Q9NQZ8 489 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 TREX1Q9NSU2 369 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 SYBUQ9NX95 663 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 SAMD15Q9P1V8 674 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 MARCH4Q9P2E8 410 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-207ENST00000425049 KCNMB2Q9Y691 235 aa16.03■□□□□ 0.16
SHANK2-207ENST00000425049 IQCF5A8MTL0 148 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 C9J4A7 227 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 MEN1O00255 615 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 PAMP19021 973 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 NMBRP28336 390 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 RAB28P51157 221 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
SHANK2-207ENST00000425049 RPS18P62269 152 aaKnown RBP16.02■□□□□ 0.16
SHANK2-207ENST00000425049 KIR2DS3Q14952 304 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 UNC5DQ6UXZ4 953 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 CDHR3Q6ZTQ4 885 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 OTOAQ7RTW8 1153 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 KRT222Q8N1A0 295 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 RAB42Q8N4Z0 105 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 LKAAEAR1Q8TD35 194 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 THAP4Q8WY91 577 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 ABHD17AQ96GS6 310 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 KIFC1Q9BW19 673 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 TRIM4Q9C037 500 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 SNX7Q9UNH6 387 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 FARSAQ9Y285 508 aaKnown RBP16.02■□□□□ 0.16
SHANK2-207ENST00000425049 MRFAP1Q9Y605 127 aa16.02■□□□□ 0.16
SHANK2-207ENST00000425049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-207ENST00000425049 GOLGA6L10A0A0M3HER8 536 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 PYCARD-AS1I3L0S3 204 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 PGRMC1O00264 195 aaKnown RBP16.01■□□□□ 0.15
SHANK2-207ENST00000425049 SUV39H1O43463 412 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 OR2B3O76000 313 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 VAPBO95292 243 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 KRT14P02533 472 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 AGXTP21549 392 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 RPS3P23396 243 aaKnown RBP eCLIP16.01■□□□□ 0.15
SHANK2-207ENST00000425049 PKLRP30613 574 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 PMS2P54278 862 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 UGT8Q16880 541 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 SLC5A12Q1EHB4 618 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 PRAMEF17Q5VTA0 474 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 IZUMO3Q5VZ72 239 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 ARMC3Q5W041 872 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 TMEM135Q86UB9 458 aa16.01■□□□□ 0.15
SHANK2-207ENST00000425049 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms