RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 SLC26A11Q86WA9 606 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 SPACA3Q8IXA5 215 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NPAS3Q8IXF0 933 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 RNF168Q8IYW5 571 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 CARFQ8N187 725 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 DRAXINQ8NBI3 349 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PRSS33Q8NF86 280 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 OR56A4Q8NGH8 313 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 WBP1Q96G27 269 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PELOQ9BRX2 385 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 DPY30Q9C005 99 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 MIEF1Q9NQG6 463 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 LUZP4Q9P127 313 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 ASIC3Q9UHC3 531 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 VANGL2Q9ULK5 521 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 AAR2Q9Y312 384 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 WIF1Q9Y5W5 379 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 LOC102723532A0A0G2JNH3 316 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF726A6NNF4 738 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 METTL12A8MUP2 240 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 A8MX80 341 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NPIPA5E9PKD4 350 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PHGDHO43175 533 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 JRKO75564 520 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 OPN1SWP03999 348 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 MYBL1P10243 752 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 TSHRP16473 764 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 SRD5A1P18405 259 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 SHMT2P34897 504 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 UGT1A5P35504 534 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 RAD23BP54727 409 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF268Q14587 947 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 EXT1Q16394 746 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 MEP1AQ16819 746 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 VWA5B1Q5TIE3 1220 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PMS2CLQ68D20 193 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 WDR93Q6P2C0 686 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 DEF8Q6ZN54 512 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF571Q7Z3V5 609 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PASD1Q8IV76 773 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 UNC5BQ8IZJ1 945 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NARS2Q96I59 477 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NTMT1Q9BV86 223 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 GPR87Q9BY21 358 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 ACTRT3Q9BYD9 372 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 FAM83DQ9H4H8 585 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 MPP6Q9NZW5 540 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 COL20A1Q9P218 1284 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 KLHL21Q9UJP4 597 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NPIPA1Q9UND3 350 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 PACSIN2Q9UNF0 486 aaPredicted RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 NOP16Q9Y3C1 178 aaKnown RBP3.48□□□□□ -1.85
TOP2A-201ENST00000423485 HES2Q9Y543 173 aa3.48□□□□□ -1.85
TOP2A-201ENST00000423485 LRRD1A4D1F6 860 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TCP11X1B4DZS4 312 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MYO1CO00159 1063 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CUTAO60888 179 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ATP9AO75110 1047 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 JTBO76095 146 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CSF3P09919 207 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MAPK1P28482 360 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 GZMKP49863 264 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CLCN7P51798 805 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ENPEPQ07075 957 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 LRP8Q14114 963 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CSHL1Q14406 222 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 NKPD1Q17RQ9 610 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 OR2A2Q6IF42 318 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SPOPLQ6IQ16 392 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PLEKHM3Q6ZWE6 761 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MAATS1Q7Z4T9 603 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 DHDDSQ86SQ9 333 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 IQCHQ86VS3 1027 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 C17orf64Q86WR6 236 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PHTF2Q8N3S3 785 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 POGLUT1Q8NBL1 392 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PCDH19Q8TAB3 1148 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ITFG1Q8TB96 612 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SFXN2Q96NB2 322 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SMG9Q9H0W8 520 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 GHITMQ9H3K2 345 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TM9SF3Q9HD45 589 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 RAB9BQ9NP90 201 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 TBX20Q9UMR3 447 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SUFUQ9UMX1 484 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CHD8Q9HCK8 2581 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 LRRC30A6NM36 301 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZBTB42B2RXF5 422 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SGK1O00141 431 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SCAMP2O15127 329 aaKnown RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 MMP20O60882 483 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 UNC5CO95185 931 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 PBX1P40424 430 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 CLCN4P51793 760 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SKOR1P84550 965 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 SLC29A2Q14542 456 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 ZNF169Q14929 603 aaPredicted RBP3.47□□□□□ -1.85
TOP2A-201ENST00000423485 KIF19Q2TAC6 998 aa3.47□□□□□ -1.85
TOP2A-201ENST00000423485 C1orf189Q5VU69 101 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms