RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PRKG2Q13237 762 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 KLHL38Q2WGJ6 581 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 TTLL9Q3SXZ7 439 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 UBAP2Q5T6F2 1119 aaKnown RBP18.1■□□□□ 0.49
PTCD3-204ENST00000418628 FAM45BPQ6NSW5 357 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CEP128Q6ZU80 1094 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 C3orf62Q6ZUJ4 267 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CLEC14AQ86T13 490 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CARFQ8N187 725 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 KDF1Q8NAX2 398 aaPredicted RBP18.1■□□□□ 0.49
PTCD3-204ENST00000418628 FLVCR1-AS1Q8TAF5 88 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 FAM45AQ8TCE6 357 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 LCN9Q8WX39 176 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 CD180Q99467 661 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 OLFM1Q99784 485 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 RHOJQ9H4E5 214 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 ZNF768Q9H5H4 540 aaKnown RBP18.1■□□□□ 0.49
PTCD3-204ENST00000418628 TAS2R13Q9NYV9 303 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 NINJ2Q9NZG7 142 aa18.1■□□□□ 0.49
PTCD3-204ENST00000418628 RUVBL2Q9Y230 463 aaKnown RBP18.1■□□□□ 0.49
PTCD3-204ENST00000418628 TLCD2A6NGC4 264 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 MATN2O00339 956 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 BTN3A1O00481 513 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 PIAS1O75925 651 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 WISP3O95389 354 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-204ENST00000418628 TSPAN12O95859 305 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ITGA2BP08514 1039 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ERGP11308 486 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 HGFP14210 728 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 STX2P32856 288 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 SHMT2P34897 504 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ETV5P41161 510 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 KPNA2P52292 529 aaKnown RBP18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ILF2Q12905 390 aaKnown RBP18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ABRQ12979 859 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 KRT33BQ14525 404 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 HECTD2Q5U5R9 776 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 CYHR1Q6ZMK1 362 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 STRA8Q7Z7C7 330 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 AMIGO1Q86WK6 493 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 FBXO15Q8NCQ5 510 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-204ENST00000418628 OR4E2Q8NGC2 313 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 MDM1Q8TC05 714 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 KLHL6Q8WZ60 621 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ZDHHC12Q96GR4 267 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 VPS39Q96JC1 886 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 SLC46A1Q96NT5 459 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 TGM7Q96PF1 710 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 CMKLR1Q99788 373 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 CPNE1Q99829 537 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 PITPNM3Q9BZ71 974 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 B3GNT4Q9C0J1 378 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 CDC42EP4Q9H3Q1 356 aaKnown RBP18.09■□□□□ 0.49
PTCD3-204ENST00000418628 SRMSQ9H3Y6 488 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 HRASLS2Q9NWW9 162 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 ZZEF1O43149 2961 aa18.09■□□□□ 0.49
PTCD3-204ENST00000418628 OR6C74A6NCV1 312 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 ARHGEF33A8MVX0 844 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 KIF1CO43896 1103 aaKnown RBP18.08■□□□□ 0.48
PTCD3-204ENST00000418628 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 PEBP1P30086 187 aaKnown RBP18.08■□□□□ 0.48
PTCD3-204ENST00000418628 CCNFP41002 786 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 SKIV2L2P42285 1042 aaKnown RBP18.08■□□□□ 0.48
PTCD3-204ENST00000418628 BDKRB1P46663 353 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 RAB28P51157 221 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 CYP4F3Q08477 520 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 NAB1Q13506 487 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 KBTBD12Q3ZCT8 623 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.08■□□□□ 0.48
PTCD3-204ENST00000418628 UGT3A1Q6NUS8 523 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 IRGCQ6NXR0 463 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 IFT20Q8IY31 132 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 LSMEM2Q8N112 164 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 FBXO39Q8N4B4 442 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 LINC01555Q8NAE3 123 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 AGBL5Q8NDL9 886 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 DENND1AQ8TEH3 1009 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 FBF1Q8TES7 1133 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 IFT81Q8WYA0 676 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 CDKL2Q92772 493 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 SLC41A2Q96JW4 573 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 CNTNAP3BQ96NU0 1288 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 RBBP8Q99708 897 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 RHOXF2Q9BQY4 288 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 CNTNAP3Q9BZ76 1288 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 XKR8Q9H6D3 395 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 OR6C2Q9NZP2 312 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 TRMT6Q9UJA5 497 aaKnown RBP18.08■□□□□ 0.48
PTCD3-204ENST00000418628 ACSL6Q9UKU0 697 aa18.08■□□□□ 0.48
PTCD3-204ENST00000418628 FAM95CA0A1B0GW59 222 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 B4E171 279 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 GFYI3L273 518 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 MYO1CO00159 1063 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 FGF3P11487 239 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-204ENST00000418628 ITIH1P19827 911 aa18.07■□□□□ 0.48
PTCD3-204ENST00000418628 TNFRSF8P28908 595 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms