RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 LENG8Q96PV6 779 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 MYLK2Q9H1R3 596 aa16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 KCNK13Q9HB14 408 aa16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 AFF3P51826 1226 aaKnown RBP16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 CCDC167Q9P0B6 97 aa16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 RPS6KA6Q9UK32 745 aa16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 PCDHGA11Q9Y5H2 935 aa16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 SPIN1Q9Y657 262 aaPredicted RBP16.61■□□□□ 0.25
SYNGAP1-202ENST00000418600 POLR1CO15160 346 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SEC24AO95486 1093 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CHRNA4P43681 627 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLC6A11P48066 632 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PSMD7P51665 324 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 TSNQ15631 228 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CAPSLQ8WWF8 208 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 MIEF2Q96C03 454 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 FAM122AQ96E09 287 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 ELL3Q9HB65 397 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PHF11Q9UIL8 331 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLC7A4O43246 635 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 STATHP02808 62 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CD63P08962 238 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 TRIM16LQ309B1 348 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 ADGRG6Q86SQ4 1221 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 APCDD1Q8J025 514 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SETD9Q8NE22 299 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 KLHL31Q9H511 634 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PTGES2Q9H7Z7 377 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PREBQ9HCU5 417 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SNX13Q9Y5W8 968 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 hCG_2014768A0A024R1R8 64 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PDPK1O15530 556 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 STX11O75558 287 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CALB2P22676 271 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLC6A2P23975 617 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 NCBP2P52298 156 aaKnown RBP eCLIP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 OR4D2P58180 307 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CDKN3Q16667 212 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SEMA4AQ9H3S1 761 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 HCSTQ9UBK5 93 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CYP17A1P05093 508 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLBPQ14493 270 aaKnown RBP eCLIP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 LIPMQ5VYY2 423 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 OR52E6Q96RD3 313 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 HSFX1Q9UBD0 423 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 WASHC1A8K0Z3 465 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 WASH3PC4AMC7 463 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PMM2O15305 246 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 AKAP8O43823 692 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 IGHEP01854 428 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 SRFP11831 508 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 MPIP34949 423 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 INAQ16352 499 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 WASH2PQ6VEQ5 465 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 NAPRTQ6XQN6 538 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 APOL4Q9BPW4 351 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 CALML5Q9NZT1 146 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PAIP2BQ9ULR5 123 aaKnown RBP16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 COQ4Q9Y3A0 265 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 OR1A2Q9Y585 309 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 PCDHGA2Q9Y5H1 932 aa16.6■□□□□ 0.25
SYNGAP1-202ENST00000418600 GRXCR2A6NFK2 248 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 LRRC10BA6NIK2 292 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 TMED10P49755 219 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 E2F1Q01094 437 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 NEK7Q8TDX7 302 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 CCDC162PA2VCL2 907 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 USP46P62068 366 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 LGALS3BPQ08380 585 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 ABHD17BQ5VST6 288 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 PEG10Q86TG7 708 aaKnown RBP16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 MDM1Q8TC05 714 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SEPHS2Q99611 448 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLC25A23Q9BV35 468 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 CXXC1Q9P0U4 656 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 MYH1P12882 1939 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 E7EQ34 232 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 RNF225M0QZC1 329 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 ECI2O75521 394 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 EGFP01133 1207 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 ALOX5P09917 674 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 CCNA2P20248 432 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SQLEQ14534 574 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 RTL4Q6ZR62 310 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 TAS1R3Q7RTX0 852 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 ACMSDQ8TDX5 336 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 XAGE5Q8WWM1 108 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SLC13A3Q8WWT9 602 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 CMTM7Q96FZ5 175 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 BDH2Q9BUT1 245 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 EPB41L4BQ9H329 900 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 KLHL33A6NCF5 533 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 CDC7O00311 574 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 SNX4O95219 450 aa16.59■□□□□ 0.25
SYNGAP1-202ENST00000418600 MYL12AP19105 171 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms