RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 STX2P32856 288 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 SKIV2L2P42285 1042 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 UCNP55089 124 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 CXADRP78310 365 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 PRKAA1Q13131 559 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 PRKG2Q13237 762 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 GBX1Q14549 363 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 FAM45BPQ6NSW5 357 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 FOXR1Q6PIV2 292 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 RAB11FIP2Q7L804 512 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 DCUN1D3Q8IWE4 304 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 GPATCH11Q8N954 259 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 SIDT2Q8NBJ9 832 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 OR4E2Q8NGC2 313 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 CFAP61Q8NHU2 1237 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 WDR36Q8NI36 951 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 FAM45AQ8TCE6 357 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 RSC1A1Q92681 617 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 INPP5DQ92835 1189 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TGM7Q96PF1 710 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 NDNQ99608 321 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 RHOXF2Q9BQY4 288 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 RAB33BQ9H082 229 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TFB2MQ9H5Q4 396 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TMEM9Q9P0T7 183 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 EPHA6Q9UF33 1036 aa12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
TMEM248-203ENST00000418375 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 TEX51A0A1B0GUA7 166 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 OR6C74A6NCV1 312 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 OR5K3A6NET4 321 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 EIF3FO00303 357 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 MATN2O00339 956 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 ATXN7O15265 892 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CAPN5O15484 640 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 KLK10O43240 276 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 C9P02748 559 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CBSLP0DN79 551 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 ENO3P13929 434 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 MPSTP25325 297 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CSTF2P33240 577 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 SHMT2P34897 504 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 PHBP35232 272 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CBSP35520 551 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 RGS4P49798 205 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 GPX6P59796 221 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 ACSBG2Q5FVE4 666 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 SNAP47Q5SQN1 464 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 LRRC8EQ6NSJ5 796 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 IRGCQ6NXR0 463 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 RELL1Q8IUW5 271 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 AGBL5Q8NDL9 886 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CD200R1Q8TD46 325 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 MAGEC3Q8TD91 643 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 SLC39A7Q92504 469 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 PRR11Q96HE9 360 aaPredicted RBP12.96□□□□□ -0.33
TMEM248-203ENST00000418375 CD180Q99467 661 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 GPR21Q99679 349 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 DPH1Q9BZG8 443 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 HRASLS2Q9NWW9 162 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 GALPQ9UBC7 116 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 KLHL3Q9UH77 587 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 MED16Q9Y2X0 877 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 BAHCC1Q9P281 2608 aa12.96□□□□□ -0.33
TMEM248-203ENST00000418375 FASNP49327 2511 aaKnown RBP12.96□□□□□ -0.34
TMEM248-203ENST00000418375 UNC13CQ8NB66 2214 aa12.96□□□□□ -0.34
TMEM248-203ENST00000418375 PMS2P1A4D2B8 440 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 FAM159BA6NKW6 160 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 A8MU76 341 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TK2O00142 265 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 PLD2O14939 933 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TOX3O15405 576 aaPredicted RBP12.95□□□□□ -0.34
TMEM248-203ENST00000418375 RASSF9O75901 435 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TNFSF15O95150 251 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 JMJD7P0C870 316 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 MPC1LP0DKB6 136 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 CD9P21926 228 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 CCNFP41002 786 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 GFERP55789 205 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TUBB4BP68371 445 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 PDAP1Q13442 181 aaKnown RBP12.95□□□□□ -0.34
TMEM248-203ENST00000418375 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 KLHL38Q2WGJ6 581 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 RBM20Q5T481 1227 aaKnown RBP12.95□□□□□ -0.34
TMEM248-203ENST00000418375 HECTD2Q5U5R9 776 aa12.95□□□□□ -0.34
TMEM248-203ENST00000418375 ZC3HC1Q86WB0 502 aaKnown RBP12.95□□□□□ -0.34
TMEM248-203ENST00000418375 CTAGE3PQ8IX95 158 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms