RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 OCMP0CE72 109 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 MAP2K4P45985 399 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 GNPDA1P46926 289 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SLC14A1Q13336 389 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SPCS2Q15005 226 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CACHD1Q5VU97 1274 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 GRAMD4Q6IC98 578 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CES5AQ6NT32 575 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 NCEH1Q6PIU2 408 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SMYD1Q8NB12 490 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ZNF548Q8NEK5 533 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 DDHD1Q8NEL9 900 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 HEBP1Q9NRV9 189 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 GPRC5BQ9NZH0 403 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 LHX3Q9UBR4 397 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 MBD1Q9UIS9 605 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 BAG5Q9UL15 447 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ANKRD36A6QL64 1941 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PRSS23O95084 383 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 DCKP27707 260 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 STK19P49842 368 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PHC1P78364 1004 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PON2Q15165 354 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 TCTN1Q2MV58 587 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PCSK9Q8NBP7 692 aaKnown RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ASIC4Q96FT7 647 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PPP3R2Q96LZ3 170 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 FEM1AQ9BSK4 669 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 VNN3Q9NY84 501 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PDE10AQ9Y233 779 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SNX5Q9Y5X3 404 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CPSF4O95639 269 aaKnown RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 EPB42P16452 691 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ITGALP20701 1170 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CRHBPP24387 322 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 RAD23AP54725 363 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 IRF5Q13568 498 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 MRPL58Q14197 206 aaKnown RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SMN1Q16637 294 aaKnown RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 POM121L1PQ3SYA9 428 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 USP51Q70EK9 711 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ZNF554Q86TJ5 538 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SPARTQ8N0X7 666 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 TMCO5AQ8N6Q1 288 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 MBOAT4Q96T53 435 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 FUNDC2Q9BWH2 189 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 UGT2B28Q9BY64 529 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 P2RY12Q9H244 342 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 SELENONQ9NZV5 590 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 PNMA8BQ9ULN7 279 aaPredicted RBP11.64□□□□□ -0.55
LIMK1-202ENST00000418310 ST14Q9Y5Y6 855 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 UNC80Q8N2C7 3258 aa11.64□□□□□ -0.55
LIMK1-202ENST00000418310 CASP8AP2Q9UKL3 1982 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 AREL1O15033 823 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 CREG1O75629 220 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 PDYNP01213 254 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 BCKDHAP12694 445 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 HNF1BP35680 557 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 TGFBR1P36897 503 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 KPNA1P52294 538 aaPredicted RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 NFATC2Q13469 925 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 ALG1LQ6GMV1 187 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 OR4F3Q6IEY1 312 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 CRTC3Q6UUV7 619 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 LRRC8DQ7L1W4 858 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 ZBTB2Q8N680 514 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 CHDHQ8NE62 594 aaPredicted RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 FOXJ1Q92949 421 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 UBE2FQ969M7 185 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 FBXO10Q9UK96 956 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 ZNF451Q9Y4E5 1061 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 TNPO3Q9Y5L0 923 aaKnown RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 GLYATL1P3A0A0U1RQE8 302 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 PRRG1O14668 218 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 FKBP9O95302 570 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 ZDHHC11BP0C7U3 371 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 BPIP17213 487 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 BCL2L1Q07817 233 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 AQP6Q13520 282 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 RAPSNQ13702 412 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 MAPK11Q15759 364 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 C6orf141Q5SZD1 244 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 DOK6Q6PKX4 331 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 ANGPTL8Q6UXH0 198 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 FKBP9P1Q75LS8 142 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 VTCN1Q7Z7D3 282 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 PAPD5Q8NDF8 572 aaKnown RBP11.63□□□□□ -0.55
LIMK1-202ENST00000418310 OR13F1Q8NGS4 319 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 TSPEARQ8WU66 669 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 NRBF2Q96F24 287 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms