RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 CFAP206Q8IYR0 622 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 MYO1HQ8N1T3 1032 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 PTGR2Q8N8N7 351 aaPredicted RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 FBXO15Q8NCQ5 510 aaPredicted RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 RAB3IL1Q8TBN0 382 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 STAG3L4Q8TBR4 150 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 ZNF483Q8TF39 744 aaPredicted RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 ASZ1Q8WWH4 475 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 GAB3Q8WWW8 586 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 EXT2Q93063 718 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 TSACCQ96A04 125 aaPredicted RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 NSUN5Q96P11 429 aaKnown RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 OR2M4Q96R27 311 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 MENTQ9BUN1 341 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 SLC12A9Q9BXP2 914 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 TWSG1Q9GZX9 223 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 MANSC1Q9H8J5 431 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 CARS2Q9HA77 564 aaKnown RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 RDH14Q9HBH5 336 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 ZBTB26Q9HCK0 441 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 TM9SF3Q9HD45 589 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 UTP6Q9NYH9 597 aaKnown RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 PSD3Q9NYI0 1048 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 NUDT4Q9NZJ9 180 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 NCKIPSDQ9NZQ3 722 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 SCHIP1Q9P0W5 487 aaPredicted RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 EIF2B4Q9UI10 523 aaKnown RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 HAO1Q9UJM8 370 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 PTBP2Q9UKA9 531 aaKnown RBP6.67□□□□□ -1.34
CPS1-202ENST00000417946 PCTPQ9UKL6 214 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 FBXO4Q9UKT5 387 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 KCNK6Q9Y257 313 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 DNAJC16Q9Y2G8 782 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 OARD1Q9Y530 152 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 ADAMTS9Q9P2N4 1935 aa6.67□□□□□ -1.34
CPS1-202ENST00000417946 PRAMEF33A0A0G2JMD5 474 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 TMEM114B3SHH9 223 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SUPT3HB4E1H0 165 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 STX16-NPEPL1H3BU86 382 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 MYO1CO00159 1063 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ZNF195O14628 629 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 STX16O14662 325 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 KPNA5O15131 536 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SLC16A5O15375 505 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 FFAR2O15552 330 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 LAMTOR5O43504 91 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PRAMEF4O60810 478 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 NDUFS2O75306 463 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SUPT3HO75486 399 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 C8GP07360 202 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ENO2P09104 434 aaPredicted RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 THEGLP0DJG4 465 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 IMPDH1P20839 514 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 MPSTP25325 297 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 AK4P27144 223 aaPredicted RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 AVPR2P30518 371 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RABIFP47224 123 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RGS4P49798 205 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 GSK3AP49840 483 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 KPNA2P52292 529 aaKnown RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 NAGLUP54802 743 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 NXPH1P58417 271 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SRP54P61011 504 aaKnown RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 HERVK_113P63132 956 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 CDKL1Q00532 357 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 CTBSQ01459 385 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 CSTF1Q05048 431 aaKnown RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 ABRQ12979 859 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RPA4Q13156 261 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PCBP2Q15366 365 aaKnown RBP eCLIP6.66□□□□□ -1.344e-7■■■■■ 45.1
CPS1-202ENST00000417946 ZNF528Q3MIS6 628 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PLK5Q496M5 336 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SYTL3Q4VX76 610 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 USP39Q53GS9 565 aaKnown RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 ZNF678Q5SXM1 525 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PRAMEF9Q5VWM5 478 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 KLC3Q6P597 504 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ENPP7Q6UWV6 458 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SLC36A4Q6YBV0 504 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 FRMD7Q6ZUT3 714 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 FAM47EQ6ZV65 393 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 UBE2R2Q712K3 238 aaPredicted RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 ARMCX6Q7L4S7 300 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 GPSM1Q86YR5 675 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 GALNT13Q8IUC8 556 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 LRRC56Q8IYG6 542 aaPredicted RBP6.66□□□□□ -1.34
CPS1-202ENST00000417946 LMNTD1Q8N9Z9 388 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 MFSD2AQ8NA29 543 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 CCDC63Q8NA47 563 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 GPBAR1Q8TDU6 330 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 SNX19Q92543 992 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ESAMQ96AP7 390 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 TMEM159Q96B96 161 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 RHBDF1Q96CC6 855 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 CHMP6Q96FZ7 201 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 C7orf26Q96N11 449 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 TSSK1BQ9BXA7 367 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 ERVK-6Q9BXR3 956 aa6.66□□□□□ -1.34
CPS1-202ENST00000417946 DRC3Q9H069 523 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms