RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 EIF2B4Q9UI10 523 aaKnown RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 ZNF221Q9UK13 617 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 CDH9Q9ULB4 789 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 TBC1D24Q9ULP9 559 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 AP3M1Q9Y2T2 418 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 POLR3HQ9Y535 204 aaPredicted RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 ORC6Q9Y5N6 252 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 GMPPBQ9Y5P6 360 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 ARL5AQ9Y689 179 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 U3KQV3 271 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 BRWD3Q6RI45 1802 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 E9PAM4 449 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 H3BRB1 525 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 AP3D1O14617 1153 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 FAM20BO75063 409 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RHOBTB1O94844 696 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 SERPINA1P01009 418 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 KRT8P05787 483 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 CYP4B1P13584 511 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 DPEP1P16444 411 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 CTSKP43235 329 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 PGFP49763 221 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RENBPP51606 427 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 OR2B6P58173 313 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RAD51Q06609 339 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 GPR50Q13585 617 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 LAPTM4AQ15012 233 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 PCBP1Q15365 356 aaKnown RBP eCLIP7.7□□□□□ -1.18
VRK2-203ENST00000417641 RBBP7Q16576 425 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 SYT16Q17RD7 645 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 AP5B1Q2VPB7 878 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 PROX2Q3B8N5 592 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 CCDC58Q4VC31 144 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 HABP4Q5JVS0 413 aaKnown RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 MLIPQ5VWP3 458 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 NXNL2Q5VZ03 156 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 ZNF544Q6NX49 715 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 ZNF551Q7Z340 670 aaPredicted RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 PHACTR4Q8IZ21 702 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 DCBLD1Q8N8Z6 715 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 OR4L1Q8NH43 312 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 FCGR1BQ92637 280 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 DNASE1L2Q92874 299 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 POP5Q969H6 163 aaKnown RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 CDKN2AIPNLQ96HQ2 116 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 EGLN2Q96KS0 407 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RAD9AQ99638 391 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 OSMRQ99650 979 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RTP3Q9BQQ7 232 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 CPPED1Q9BRF8 314 aaPredicted RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 TBCDQ9BTW9 1192 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 THUMPD3Q9BV44 507 aaKnown RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 CATSPERZQ9NTU4 200 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 PLCXD1Q9NUJ7 323 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 C1orf109Q9NX04 203 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 UXTQ9UBK9 157 aaPredicted RBP7.7□□□□□ -1.18
VRK2-203ENST00000417641 DKK3Q9UBP4 350 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 NUDT5Q9UKK9 219 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 RNF6Q9Y252 685 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 TRAPPC4Q9Y296 219 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 HS3ST4Q9Y661 456 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 MAU2Q9Y6X3 613 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 PAPPA2Q9BXP8 1791 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 EP400Q96L91 3159 aa7.7□□□□□ -1.18
VRK2-203ENST00000417641 MIA3Q5JRA6 1907 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 TBKBP1A7MCY6 615 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 EVPLLA8MZ36 301 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 ARHGAP33O14559 1287 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 OR7A17O14581 309 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 PCDHGA12O60330 932 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 RECQL5O94762 991 aaPredicted RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 CAPN1P07384 714 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 HAPLN1P10915 354 aaPredicted RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 CD9P21926 228 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 PTPN6P29350 595 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 FMO4P31512 558 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 SLC19A1P41440 591 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 LHX1P48742 406 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 CLK1P49759 484 aaKnown RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 MLLT6P55198 1093 aaPredicted RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 ABRAXAS2Q15018 415 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 PCBP2Q15366 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
VRK2-203ENST00000417641 TBCEQ15813 527 aaPredicted RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 SMU1Q2TAY7 513 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 PARP15Q460N3 678 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 Q5BKY6 102 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 LRIF1Q5T3J3 769 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 SIGIRRQ6IA17 410 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 RNF165Q6ZSG1 346 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 LRRC8DQ7L1W4 858 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 CCDC103Q8IW40 242 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 ENTHD1Q8IYW4 607 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 NKAPQ8N5F7 415 aaKnown RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 TTC29Q8NA56 475 aaPredicted RBP7.69□□□□□ -1.18
VRK2-203ENST00000417641 HCAR2Q8TDS4 363 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 TMEM40Q8WWA1 233 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 HMCESQ96FZ2 354 aa7.69□□□□□ -1.18
VRK2-203ENST00000417641 SMARCD1Q96GM5 515 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms