RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CD274Q9NZQ7 290 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 CPSF2Q9P2I0 782 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 LRIT1Q9P2V4 623 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 DCDC2Q9UHG0 476 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 MID2Q9UJV3 735 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 NOVA2Q9UNW9 492 aaKnown RBP8.25□□□□□ -1.09
TRIM48-201ENST00000417545 CDYLQ9Y232 598 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 MED16Q9Y2X0 877 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 ST14Q9Y5Y6 855 aa8.25□□□□□ -1.09
TRIM48-201ENST00000417545 HMX2A2RU54 273 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NCF1BA6NI72 391 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NCF1CA8MVU1 366 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CDC7O00311 574 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TRIM38O00635 465 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CDX4O14627 284 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 SH3BP5O60239 455 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NOBOXO60393 691 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 RFPL1O75677 317 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 C1orf105O95561 183 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 EML2O95834 649 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GUCA1CO95843 209 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ANXA5P08758 320 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NEFHP12036 1026 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NCF1P14598 390 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 BRAFP15056 766 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CD1DP15813 335 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GLB1P16278 677 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ALDH4A1P30038 563 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 SHMT2P34897 504 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 SLC19A1P41440 591 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TIAL1Q01085 375 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GBX1Q14549 363 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ACAP2Q15057 778 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TSNQ15631 228 aaKnown RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 THEMIS2Q5TEJ8 643 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TMEM207Q6UWW9 146 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 KANSL1Q7Z3B3 1105 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 OOSP2Q86WS3 158 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 SYTL1Q8IYJ3 562 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 Q8N9G6 341 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GPR156Q8NFN8 814 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 OR10G6Q8NH81 332 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 IFI44Q8TCB0 444 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ATL1Q8WXF7 558 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ISL2Q96A47 359 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 PGM2Q96G03 612 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 MED8Q96G25 268 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 APOPT1Q96IL0 206 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CAMK1GQ96NX5 476 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ABCG4Q9H172 646 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 SRMSQ9H3Y6 488 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 KIR3DX1Q9H7L2 352 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 PARVBQ9HBI1 364 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TMBIM4Q9HC24 238 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 RXFP3Q9NSD7 469 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 NKIRAS1Q9NYS0 192 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 WWOXQ9NZC7 414 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ZNF624Q9P2J8 865 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 CIDEBQ9UHD4 219 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GRID1Q9ULK0 1009 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 TMCO1Q9UM00 188 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 PLAGL1Q9UM63 463 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 BTBD3Q9Y2F9 522 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 WDFY4Q6ZS81 3184 aa8.24□□□□□ -1.09
TRIM48-201ENST00000417545 ARHGEF17Q96PE2 2063 aaPredicted RBP8.24□□□□□ -1.09
TRIM48-201ENST00000417545 GSAPA4D1B5 854 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 A6NCN8 305 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 PRR19A6NJB7 356 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 ARHGEF33A8MVX0 844 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 FOXO6A8MYZ6 492 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 HMGB1P1B2RPK0 211 aaPredicted RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 ATP8B1O43520 1251 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 NUDT21O43809 227 aaKnown RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 DUX1O43812 170 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 KERAO60938 352 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 SPAG7O75391 227 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 PSIP1O75475 530 aaKnown RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 MATN4O95460 622 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 CKMT2P17540 419 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 SDHBP21912 280 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 ACADLP28330 430 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 RPA3P35244 121 aaPredicted RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 HSD17B2P37059 387 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 ARL1P40616 181 aaPredicted RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 MAGEA12P43365 314 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 FASLGP48023 281 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 AP1S2P56377 157 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 MAGOHP61326 146 aaKnown RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 UBE2IP63279 158 aaKnown RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 GPR18Q14330 331 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 AMZ1Q400G9 498 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 CCDC153Q494R4 210 aa8.23□□□□□ -1.09
TRIM48-201ENST00000417545 ZNF658BQ4V348 819 aaPredicted RBP8.23□□□□□ -1.09
TRIM48-201ENST00000417545 N4BP2L1Q5TBK1 243 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms