RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CTBP1Q13363 440 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 KRT33BQ14525 404 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 GBX1Q14549 363 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 LINC00303Q3SY05 128 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 ACSBG2Q5FVE4 666 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 COLEC12Q5KU26 742 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 PTRHD1Q6GMV3 140 aaKnown RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 TRMT10BQ6PF06 316 aaKnown RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 SPESP1Q6UW49 350 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 UNC5AQ6ZN44 842 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 CDHR3Q6ZTQ4 885 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 AMIGO1Q86WK6 493 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 CILP2Q8IUL8 1156 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 RASGRP3Q8IV61 690 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 PPIL6Q8IXY8 311 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 IL22RA1Q8N6P7 574 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 C19orf47Q8N9M1 422 aaKnown RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 SIDT2Q8NBJ9 832 aaKnown RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 SLC38A9Q8NBW4 561 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 OR1L3Q8NH93 324 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 OR5K2Q8NHB8 316 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 DENND1AQ8TEH3 1009 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 CT55Q8WUE5 264 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 HEXDCQ8WVB3 486 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 STARD8Q92502 1023 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 PEX13Q92968 403 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 CFAP36Q96G28 342 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 SIGLEC10Q96LC7 697 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 UBL7Q96S82 380 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 PITPNM3Q9BZ71 974 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 RAB33BQ9H082 229 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 SRMSQ9H3Y6 488 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 FAM60AQ9NP50 221 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 BTRCQ9Y297 605 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 TMEM184BQ9Y519 407 aaPredicted RBP9.9□□□□□ -0.82
HDLBP-206ENST00000417540 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.82
HDLBP-206ENST00000417540 ARHGEF33A8MVX0 844 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TMEM150CB9EJG8 249 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NDUFS3O75489 264 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 SPAG6O75602 509 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 PIAS1O75925 651 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NTRK1P04629 796 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FAM87AP0C7U9 286 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ERVK-10P10266 1014 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FGF5P12034 268 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 OGNP20774 298 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 CD82P27701 267 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 RPL21P46778 160 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 GABRA4P48169 554 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NPY2RP49146 381 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TTPAP49638 278 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ATP1A2P50993 1020 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ITGA8P53708 1063 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 UCNP55089 124 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TIAL1Q01085 375 aaKnown RBP eCLIP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 CDC20Q12834 499 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 RPA4Q13156 261 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 IL10RAQ13651 578 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FASTKQ14296 549 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 AARS2Q5JTZ9 985 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 UBAP2Q5T6F2 1119 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FAM199XQ6PEV8 388 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FAM198BQ6UWH4 519 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 MBOAT1Q6ZNC8 495 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 CAPN12Q6ZSI9 719 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NLRP9Q7RTR0 991 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 PIWIL4Q7Z3Z4 852 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 KCNMB4Q86W47 210 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 DCUN1D3Q8IWE4 304 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NLGN4XQ8N0W4 816 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 D2HGDHQ8N465 521 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 MCUQ8NE86 351 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NLGN4YQ8NFZ3 816 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 GRK7Q8WTQ7 553 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 SLCO2A1Q92959 643 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ZNF501Q96CX3 271 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 STAMBPL1Q96FJ0 436 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 ZDHHC12Q96GR4 267 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 SGSM3Q96HU1 749 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FCRL4Q96PJ5 515 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TRAPPC9Q96Q05 1148 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 KRT12Q99456 494 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 NAP1L3Q99457 506 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TWSG1Q9GZX9 223 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TRIT1Q9H3H1 467 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 FBXO8Q9NRD0 319 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 HOMER3Q9NSC5 361 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 IARS2Q9NSE4 1012 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 C20orf96Q9NUD7 363 aaPredicted RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 SAMD15Q9P1V8 674 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 PCYOX1Q9UHG3 505 aa9.89□□□□□ -0.83
HDLBP-206ENST00000417540 TLN1Q9Y490 2541 aaKnown RBP9.89□□□□□ -0.83
HDLBP-206ENST00000417540 COL6A6A6NMZ7 2263 aa9.88□□□□□ -0.83
HDLBP-206ENST00000417540 FAM237BA0A1B0GVD1 139 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms