RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C1RP00736 705 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 FABP3P05413 133 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 CXCR2P25025 360 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 NOVP48745 357 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 RPIAP49247 311 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PIGGQ5H8A4 983 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SLC13A3Q8WWT9 602 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 TMEM203Q969S6 136 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 EXOSC8Q96B26 276 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 TRNT1Q96Q11 434 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SEMA3GQ9NS98 782 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 GPSM3Q9Y4H4 160 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 NUP214P35658 2090 aaPredicted RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 NDST3O95803 873 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 RAP2AP10114 183 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 UROSP10746 265 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 RPS24P62847 133 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 GALNT10Q86SR1 603 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 SMG8Q8ND04 991 aaKnown RBP12.67□□□□□ -0.38
SCN1B-202ENST00000415950 OR10G6Q8NH81 332 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 STON2Q8WXE9 905 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 IL4I1Q96RQ9 567 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 EMCNQ9ULC0 261 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 PPP2R3BQ9Y5P8 575 aa12.67□□□□□ -0.38
SCN1B-202ENST00000415950 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ECI2O75521 394 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CLPXO76031 633 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 KCNAB2Q13303 367 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 PABPC1LQ4VXU2 614 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 BICRALQ6AI39 1079 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 NCCRP1Q6ZVX7 275 aaPredicted RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ZZZ3Q8IYH5 903 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 SUN5Q8TC36 379 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CGREF1Q99674 301 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 MED28Q9H204 178 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CCDC59Q9P031 241 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ACTR3BQ9P1U1 418 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 TBC1D24Q9ULP9 559 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CORO2BQ9UQ03 480 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 FAM47E-STBD1D6RA91 191 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 S100A6P06703 90 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CYP3A5P20815 502 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 CDH5P33151 784 aaPredicted RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 PBX3P40426 434 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 MNDAP41218 407 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 BCAP31P51572 246 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 SRSF11Q05519 484 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 PTGR1Q14914 329 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 PDCD4Q53EL6 469 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 BRMS1LQ5PSV4 323 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ANXA8L1Q5VT79 327 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 SULT1C3Q6IMI6 304 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 RPTNQ6XPR3 784 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 NAA50Q9GZZ1 169 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 A8MU76 341 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 GMFGO60234 142 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ACVRL1P37023 503 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 MAP2K4P45985 399 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 HNRNPDQ14103 355 aaKnown RBP12.66□□□□□ -0.38
SCN1B-202ENST00000415950 USP30Q70CQ3 517 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 C11orf65Q8NCR3 313 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 TRPV1Q8NER1 839 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 ZMIZ2Q8NF64 920 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 BEX2Q9BXY8 128 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 TXNRD2Q9NNW7 524 aa12.66□□□□□ -0.38
SCN1B-202ENST00000415950 A0A075B6Q4 140 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 STBD1O95210 358 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 IL4RP24394 825 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CHIT1Q13231 466 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 FOXB2Q5VYV0 432 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 LAPTM4BQ86VI4 370 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 HID1Q8IV36 788 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CMTR2Q8IYT2 770 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SLC15A4Q8N697 577 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 NPWQ8N729 165 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SLC9A6Q92581 669 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 FADS2P1A8MWK0 482 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 G3V2L1 256 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 GRID2O43424 1007 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 CNTN5O94779 1100 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 IFNW1P05000 195 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 PPIBP23284 216 aaKnown RBP12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ITPKBP27987 946 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 ARSFP54793 590 aa12.65□□□□□ -0.38
SCN1B-202ENST00000415950 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms