RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC22A2O15244 555 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 PCDH7O60245 1069 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 WDPCPO95876 746 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 ERVK-10P10266 1014 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 GNAZP19086 355 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 HOXC8P31273 242 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CHRNA7P36544 502 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CX3CL1P78423 397 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 HSPB3Q12988 150 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 KYNUQ16719 465 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 SLC30A6Q6NXT4 461 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 RBMS3Q6XE24 437 aaKnown RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CAMKMTQ7Z624 323 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 TRPT1Q86TN4 253 aaKnown RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 TRIML1Q8N9V2 468 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CNBD1Q8NA66 436 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 OR10V1Q8NGI7 309 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 OR5M8Q8NGP6 311 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 GRAPLQ8TC17 118 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 GRHL3Q8TE85 626 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZFAND2BQ8WV99 257 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 HSD17B8Q92506 261 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 SLAMF9Q96A28 289 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 DHX58Q96C10 678 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 PGAP3Q96FM1 320 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 MYADMQ96S97 322 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 RTP3Q9BQQ7 232 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CENPOQ9BU64 300 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 GOLPH3LQ9H4A5 285 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 BICC1Q9H694 974 aaKnown RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 NOL11Q9H8H0 719 aaKnown RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 PIH1D3Q9NQM4 214 aaKnown RBP3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 DPP3Q9NY33 737 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 HAO2Q9NYQ3 351 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 PTTG2Q9NZH5 202 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 LRWD1Q9UFC0 647 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 TUBE1Q9UJT0 475 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 NUP160Q12769 1436 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CASKIN1Q8WXD9 1431 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 ABCA8O94911 1581 aa3.5□□□□□ -1.85
HMGB1P11-201ENST00000413899 CLASP1Q7Z460 1538 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CKAP5Q14008 2032 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ADGBQ8N7X0 1667 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ITSN2Q9NZM3 1697 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 FLT1P17948 1338 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 KIF14Q15058 1648 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TRBC2A0A5B9 178 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 BLOC1S5-TXNDC5H3BN57 136 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 GAPDHSO14556 408 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 PSMD10O75832 226 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CAVIN2O95810 425 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TRUB2O95900 331 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 DNASE1P24855 282 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 MTHFRP42898 656 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CAPZA2P47755 286 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZNF75DP51815 510 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TPD52P55327 224 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 KRTAP10-9P60411 292 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 HNRNPKP61978 463 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TUBB4BP68371 445 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRKCZQ05513 592 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 LGALS3BPQ08380 585 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 AIMP1Q12904 312 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TMEM266Q2M3C6 531 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 RPUSD3Q6P087 351 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 RBPMS2Q6ZRY4 209 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 PLPPR4Q7Z2D5 763 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZNF554Q86TJ5 538 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZNF329Q86UD4 541 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 COMMD2Q86X83 199 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 FAM114A1Q8IWE2 563 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TDRD5Q8NAT2 981 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 KCTD6Q8NC69 237 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 FGFBP3Q8TAT2 258 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 ZNF501Q96CX3 271 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 SPDL1Q96EA4 605 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CFAP57Q96MR6 1250 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 F2RL3Q96RI0 385 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 PSD2Q9BQI7 771 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 OPA3Q9H6K4 179 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 TBC1D17Q9HA65 648 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 C2orf42Q9NWW7 574 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 STK26Q9P289 416 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 B3GAT1Q9P2W7 334 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 MTUS1Q9ULD2 1270 aa3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 CDK13Q14004 1512 aaKnown RBP3.49□□□□□ -1.85
HMGB1P11-201ENST00000413899 PTPN23Q9H3S7 1636 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 SYNJ2O15056 1496 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 ERCC6L2Q5T890 1561 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 A0A1W2PPM1 405 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 A0A1W2PPQ1 181 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PRR23AA6NEV1 266 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 DUXAA6NLW8 204 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PTGESO14684 152 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 LINC01565O15544 149 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 TIMM44O43615 452 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PIGNO95427 931 aa3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 PLGP00747 810 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P11-201ENST00000413899 DNTTP04053 509 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms