RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CDC16Q13042 620 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 DEFB110Q30KQ9 67 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 BCL7AQ4VC05 210 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 CCDC70Q6NSX1 233 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 MAP7D3Q8IWC1 876 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 GPR135Q8IZ08 494 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 NXPE1Q8N323 547 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 LCN9Q8WX39 176 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 RAPGEF5Q92565 580 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 RELTQ969Z4 430 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 PTERQ96BW5 349 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 CNDP1Q96KN2 507 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 LINC00615Q96LM1 132 aaPredicted RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 RNF157Q96PX1 679 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 TRIM8Q9BZR9 551 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 GLOD4Q9HC38 313 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 FAM60AQ9NP50 221 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 SLC6A20Q9NP91 592 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 UBP1Q9NZI7 540 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.23□□□□□ -0.93
RFFL-203ENST00000413582 IFT80Q9P2H3 777 aaPredicted RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 UVRAGQ9P2Y5 699 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 DHCR7Q9UBM7 475 aaKnown RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 NDOR1Q9UHB4 597 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 GPN3Q9UHW5 284 aaPredicted RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 HEY1Q9Y5J3 304 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 HEBP2Q9Y5Z4 205 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 AP1M2Q9Y6Q5 423 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 COLEC10Q9Y6Z7 277 aa9.23□□□□□ -0.93
RFFL-203ENST00000413582 NCOA6Q14686 2063 aaPredicted RBP9.23□□□□□ -0.93
RFFL-203ENST00000413582 LOC285095A0A1B0GVY8 99 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 RCCD1A6NED2 376 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 MAP3K7O43318 606 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 BUD23O43709 281 aaKnown RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 KIF5CO60282 957 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 OR2B3O76000 313 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 PROSCO94903 275 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 PRAMEF1O95521 474 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 POLBP06746 335 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 CTSBP07858 339 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 CD63P08962 238 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 PYGMP11217 842 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 MSH3P20585 1137 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 MMP11P24347 488 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 CHRNA4P43681 627 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TDGF1P3P51864 188 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 WNT3AP56704 352 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ETF1P62495 437 aaKnown RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 DCDP81605 110 aaKnown RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 KRT33BQ14525 404 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TLR1Q15399 786 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TESK1Q15569 626 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ZIC1Q15915 447 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 NKAIN1Q4KMZ8 207 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 SIRPB2Q5JXA9 342 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 AGAP7PQ5VUJ5 663 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 PRAMEF13Q5VWM6 474 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 SLC9A4Q6AI14 798 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ZNF324BQ6AW86 544 aaPredicted RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 KDELC1Q6UW63 502 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 FAM180AQ6UWF9 173 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 NPNTQ6UXI9 565 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 BNC2Q6ZN30 1099 aaPredicted RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 GLT6D1Q7Z4J2 308 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TRIM73Q86UV7 250 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ADGRF3Q8IZF5 1079 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 C19orf47Q8N9M1 422 aaKnown RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 TRIM58Q8NG06 486 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 OR52E1Q8NGJ3 308 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 DNAJB14Q8TBM8 379 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 HM13Q8TCT9 377 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 AGAP4Q96P64 663 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TRIM56Q9BRZ2 755 aaKnown RBP9.22□□□□□ -0.93
RFFL-203ENST00000413582 CCM2Q9BSQ5 444 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 AP1M1Q9BXS5 423 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 SLC22A11Q9NSA0 550 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 OLAHQ9NV23 265 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 ACTR10Q9NZ32 417 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 HACD3Q9P035 362 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 CTTNBP2NLQ9P2B4 639 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 TFR2Q9UP52 801 aa9.22□□□□□ -0.93
RFFL-203ENST00000413582 CCDC78A2IDD5 438 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 USP27XA6NNY8 438 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 C2orf74A8MZ97 194 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 ZNF487B1APH4 448 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 SOCS6O14544 535 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 PCDH17O14917 1159 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
RFFL-203ENST00000413582 JRKO75564 520 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 SNRPB2P08579 225 aaKnown RBP9.21□□□□□ -0.94
RFFL-203ENST00000413582 KDELR1P24390 212 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 PTPN3P26045 913 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 CD68P34810 354 aaPredicted RBP9.21□□□□□ -0.94
RFFL-203ENST00000413582 PRLHRP49683 370 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 KCNK10P57789 538 aa9.21□□□□□ -0.94
RFFL-203ENST00000413582 PDK1Q15118 436 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms