RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 CDK4P11802 303 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 GJA1P17302 382 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 PCGF2P35227 344 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 KCNJ4P48050 445 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 ADARP55265 1226 aaKnown RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 NME5P56597 212 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 PDE1BQ01064 536 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 AKAP17AQ02040 695 aaKnown RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 LRRC74AQ0VAA2 488 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 TRAF2Q12933 501 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 CALCRLQ16602 461 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 FUT11Q495W5 492 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 HSP90AA5PQ58FG0 334 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 SHEQ5VZ18 495 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 ZDHHC20Q5W0Z9 365 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 AWAT2Q6E213 333 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 RHBDF2Q6PJF5 856 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 C9orf47Q6ZRZ4 202 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 C11orf57Q6ZUT1 292 aaPredicted RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 Q75L30 129 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 SMRP1Q8NCR6 262 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 LPCAT1Q8NF37 534 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 B4GALNT2Q8NHY0 566 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 SLC38A5Q8WUX1 472 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 SLC13A3Q8WWT9 602 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 MTBPQ96DY7 904 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 QRFPRQ96P65 431 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 FAM111AQ96PZ2 611 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 OR1F2PQ96R84 312 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 SLC22A12Q96S37 553 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 INPP5KQ9BT40 448 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 ANP32EQ9BTT0 268 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 DNAJC17Q9NVM6 304 aaKnown RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 RCC2Q9P258 522 aaKnown RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 TRPC4Q9UBN4 977 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 AURKCQ9UQB9 309 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 RPH3AQ9Y2J0 694 aaPredicted RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 LAMC3Q9Y6N6 1575 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 ASTN2O75129 1339 aaPredicted RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 PDS5AQ29RF7 1337 aaKnown RBP4.95□□□□□ -1.62
LSM5-206ENST00000409987 ZNF541Q9H0D2 1346 aa4.95□□□□□ -1.62
LSM5-206ENST00000409987 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 SLC9B1P1A6NJY1 282 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 H0YIN7 160 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PLK4O00444 970 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ZBTB43O43298 467 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 TRIM16O95361 564 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 VIMP08670 466 aaKnown RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 OR52Z1P0C646 297 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 LINGO3P0C6S8 592 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PFKFB1P16118 471 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 FERP16591 822 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 DNASE1P24855 282 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PRPHP41219 470 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 CRKLP46109 303 aaKnown RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 RABIFP47224 123 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ATXN3P54252 364 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 ST8SIA6P61647 398 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 COG7P83436 770 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 RBPJQ06330 500 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 RUNX1T1Q06455 604 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PTPRCAPQ14761 206 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PDK1Q15118 436 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 INAQ16352 499 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 HLFQ16534 295 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 TAZQ16635 292 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 RAB6CQ53S08 254 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 C12orf60Q5U649 245 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ALS2CLQ60I27 953 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 MIER3Q7Z3K6 550 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ZER1Q7Z7L7 766 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 MAP7D3Q8IWC1 876 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ZNF595Q8IYB9 648 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 C1orf87Q8N0U7 546 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 CLYBLQ8N0X4 340 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 FBXL14Q8N1E6 418 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 AFAP1Q8N556 730 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 SLC5A8Q8N695 610 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 DENND6BQ8NEG7 585 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 C9orf43Q8TAL5 461 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 WDR20Q8TBZ3 569 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 DNAAF4Q8WXU2 420 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 PRCCQ92733 491 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 DNASE1L2Q92874 299 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ABTB1Q969K4 478 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 ERLEC1Q96DZ1 483 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 SPACA9Q96E40 222 aaPredicted RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 PHF21BQ96EK2 531 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ABHD6Q9BV23 337 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ZNF350Q9GZX5 532 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 RAB6CQ9H0N0 254 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 IL25Q9H293 177 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 POLE3Q9NRF9 147 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 COMMD8Q9NX08 183 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ZNF224Q9NZL3 707 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 KLHL9Q9P2J3 617 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 CGNQ9P2M7 1197 aaKnown RBP4.94□□□□□ -1.62
LSM5-206ENST00000409987 SIX4Q9UIU6 781 aa4.94□□□□□ -1.62
LSM5-206ENST00000409987 ITGA11Q9UKX5 1188 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms