RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 NUDT8Q8WV74 236 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 CANT1Q8WVQ1 401 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 GLYATL1Q969I3 302 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 MIEF2Q96C03 454 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 MYCBPQ99417 103 aaPredicted RBP19.65■□□□□ 0.74
USP39-204ENST00000409766 EFHD1Q9BUP0 239 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 TRIM15Q9C019 465 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 ARMC1Q9NVT9 282 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 CNOT11Q9UKZ1 510 aaKnown RBP19.65■□□□□ 0.74
USP39-204ENST00000409766 ITM2BQ9Y287 266 aa19.65■□□□□ 0.74
USP39-204ENST00000409766 TCF20Q9UGU0 1960 aaKnown RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 QSOX1O00391 747 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 KPNA3O00505 521 aaPredicted RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 PAPLNO95428 1278 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 KRT6AP02538 564 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 KRT6BP04259 564 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 VARSP26640 1264 aaKnown RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 SLC6A11P48066 632 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 KRT6CP48668 564 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 LIPEQ05469 1076 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 PTGR1Q14914 329 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 CPSF6Q16630 551 aaKnown RBP eCLIP19.64■□□□□ 0.74
USP39-204ENST00000409766 GGTA1PQ4G0N0 100 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 OR52E8Q6IFG1 317 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 NEK5Q6P3R8 708 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 PTRH1Q86Y79 214 aaKnown RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 SPPL2CQ8IUH8 684 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 NPAS3Q8IXF0 933 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 RASGEF1AQ8N9B8 481 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 TMEM74Q96NL1 305 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 ASB16Q96NS5 453 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 LRTM1Q9HBL6 345 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 CCM2LQ9NUG4 571 aaPredicted RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 ASIC5Q9NY37 505 aa19.64■□□□□ 0.74
USP39-204ENST00000409766 CNOT6Q9ULM6 557 aaKnown RBP19.64■□□□□ 0.74
USP39-204ENST00000409766 ATG2AQ2TAZ0 1938 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 KCNE1BA0A087WTH5 132 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 PABPN1LA6NDY0 278 aaKnown RBP19.64■□□□□ 0.73
USP39-204ENST00000409766 TMEM202A6NGA9 273 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 ARPC2O15144 300 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 DENRO43583 198 aaKnown RBP19.64■□□□□ 0.73
USP39-204ENST00000409766 DGKQP52824 942 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 METAP1P53582 386 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 EEFSECP57772 596 aaKnown RBP19.64■□□□□ 0.73
USP39-204ENST00000409766 ACOX1Q15067 660 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 IMPG1Q17R60 797 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 PRR23BQ6ZRT6 265 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 HID1Q8IV36 788 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 RAVER1Q8IY67 606 aaKnown RBP19.64■□□□□ 0.73
USP39-204ENST00000409766 NRSN1Q8IZ57 195 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 GOLM1Q8NBJ4 401 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 PYCR2Q96C36 320 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 AP2M1Q96CW1 435 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 MUC13Q9H3R2 512 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 ZFC3H1O60293 1989 aaKnown RBP19.64■□□□□ 0.73
USP39-204ENST00000409766 LRRK1Q38SD2 2015 aa19.64■□□□□ 0.73
USP39-204ENST00000409766 MUC22E2RYF6 1773 aaPredicted RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 C15orf38-AP3S2A0A0A6YYH1 394 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 KRT87PA6NCN2 255 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 PSMD11O00231 422 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SPINT1O43278 529 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SEC22BO75396 215 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 PRNPP04156 253 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 PIM1P11309 404 aaPredicted RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 ZNF26P17031 533 aaPredicted RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 CTSCP53634 463 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 CAPRIN2Q6IMN6 1127 aaKnown RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 ARPINQ7Z6K5 226 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 L3MBTL4Q8NA19 623 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 MTFMTQ96DP5 389 aaKnown RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 KCTD14Q9BQ13 255 aaPredicted RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 ACPTQ9BZG2 426 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SEMA6AQ9H2E6 1030 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 C1orf109Q9NX04 203 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 RAB26Q9ULW5 256 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SNX13Q9Y5W8 968 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 WNT9AO14904 365 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 TSPAN6O43657 245 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 NFATC1O95644 943 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 PDYNP01213 254 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 C9orf64Q5T6V5 341 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 HMBOX1Q6NT76 420 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 GALNT13Q8IUC8 556 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SMARCD2Q92925 531 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 EME1Q96AY2 570 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 COQ10AQ96MF6 247 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 WRAP53Q9BUR4 548 aaKnown RBP19.63■□□□□ 0.73
USP39-204ENST00000409766 ZFP14Q9HCL3 533 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 SLC22A14Q9Y267 594 aa19.63■□□□□ 0.73
USP39-204ENST00000409766 H0Y858 1186 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 TXNDC9O14530 226 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 GSTM1P09488 218 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 ZCCHC18P0CG32 403 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 PRLHRP49683 370 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 GSTM4Q03013 218 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 TMEM115Q12893 351 aaPredicted RBP19.62■□□□□ 0.73
USP39-204ENST00000409766 PDK3Q15120 406 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 FXNQ16595 210 aa19.62■□□□□ 0.73
USP39-204ENST00000409766 HNRNPA1L2Q32P51 320 aaKnown RBP19.62■□□□□ 0.73
USP39-204ENST00000409766 CACHD1Q5VU97 1274 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms