RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 NTRK1P04629 796 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 RAB40ALP0C0E4 278 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 ZSCAN5DPP0CG00 497 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 RPS3P23396 243 aaKnown RBP eCLIP14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 PTPN4P29074 926 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 MAGEA6P43360 314 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 PRKG2Q13237 762 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 KIR2DS3Q14952 304 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 TMED2Q15363 201 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 RNF187Q5TA31 235 aaPredicted RBP14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 MRNIPQ6NTE8 343 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 C16orf46Q6P387 395 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 SPESP1Q6UW49 350 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 UNC5DQ6UXZ4 953 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 UNC5AQ6ZN44 842 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 ZNF534Q76KX8 674 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 SYVN1Q86TM6 617 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 GPR135Q8IZ08 494 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 RASGEF1CQ8N431 466 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 GLIS1Q8NBF1 620 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 DENND1AQ8TEH3 1009 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 ZNF778Q96MU6 729 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 TRAPPC9Q96Q05 1148 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 C17orf62Q9BQA9 187 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 AP1M1Q9BXS5 423 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 TWSG1Q9GZX9 223 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 ACTR10Q9NZ32 417 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 SLC2A6Q9UGQ3 507 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 FARSAQ9Y285 508 aaKnown RBP14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 AP1M2Q9Y6Q5 423 aa14.08□□□□□ -0.16
NIF3L1-205ENST00000409588 H3BMM5 538 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 MEN1O00255 615 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 ZSCAN12O43309 604 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 SLC28A2O43868 658 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 OR1I1O60431 355 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 NDUFS3O75489 264 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 FKBP9O95302 570 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 PRKAR1AP10644 381 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 MLNP12872 115 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 PAMP19021 973 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 F8A1P23610 371 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 AOAHP28039 575 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 OAS2P29728 719 aaKnown RBP14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 CCR7P32248 378 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 ADARP55265 1226 aaKnown RBP14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 HSPA14Q0VDF9 509 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 GPR19Q15760 415 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 DEFB109BQ30KR1 87 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 OR5AR1Q8NGP9 310 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 MAGEC3Q8TD91 643 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 HGH1Q9BTY7 390 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 RAB11FIP5Q9BXF6 653 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 ANAPC2Q9UJX6 822 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 KCNMB2Q9Y691 235 aa14.07□□□□□ -0.16
NIF3L1-205ENST00000409588 BOD1L1Q8NFC6 3051 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 E7EQ34 232 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 MKRN2OSH3BPM6 223 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 TIAF1O95411 115 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 CHRM5P08912 532 aaPredicted RBP14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 CYP2A7P20853 494 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 AGXTP21549 392 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 KCNJ1P48048 391 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 RAB28P51157 221 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 ITGA1P56199 1179 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 BRD3Q15059 726 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 KYNUQ16719 465 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 UGT8Q16880 541 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 SLC5A12Q1EHB4 618 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 PTRHD1Q6GMV3 140 aaKnown RBP14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 DSELQ8IZU8 1212 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 RAB42Q8N4Z0 105 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 PRELID2Q8N945 189 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 MCUQ8NE86 351 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 C9orf43Q8TAL5 461 aaPredicted RBP14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 CT55Q8WUE5 264 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 MR1Q95460 341 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 CLIP3Q96DZ5 547 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 OR2A14Q96R47 310 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 NLNQ9BYT8 704 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 SLC7A5P2Q9GIP4 190 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 SOX13Q9UN79 622 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 ICKQ9UPZ9 632 aa14.06□□□□□ -0.16
NIF3L1-205ENST00000409588 TMEM150CB9EJG8 249 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 CES2O00748 559 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 ST6GAL1P15907 406 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 CXCR5P32302 372 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 CCNFP41002 786 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 ARCN1P48444 511 aaKnown RBP14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 KCNC4Q03721 635 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 CYP1B1Q16678 543 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 PLEKHS1Q5SXH7 462 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 TCTN3Q6NUS6 607 aa14.05□□□□□ -0.16
NIF3L1-205ENST00000409588 TLDC1Q6P9B6 456 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms