RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 SLC32A1Q9H598 525 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 ZNF385DQ9H6B1 395 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 MRPL40Q9NQ50 206 aaKnown RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 G3BP2Q9UN86 482 aaKnown RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.21
GPNMB-203ENST00000409458 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
GPNMB-203ENST00000409458 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 H0Y8X5 98 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 DCXO43602 365 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 KATNA1O75449 491 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ATP6AP2O75787 350 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 DNAJC8O75937 253 aaPredicted RBP13.7□□□□□ -0.22
GPNMB-203ENST00000409458 OTCP00480 354 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ACP5P13686 325 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 EPB42P16452 691 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 AOC1P19801 751 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 HNRNPA2B1P22626 353 aaKnown RBP13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ACADLP28330 430 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 CCR3P51677 355 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 KIAA1024LP59773 190 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 GCNT7Q6ZNI0 430 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 PDZD3Q86UT5 571 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
GPNMB-203ENST00000409458 CEP70Q8NHQ1 597 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ATP6V1E2Q96A05 226 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 PYCR2Q96C36 320 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 SHDQ96IW2 340 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ZDHHC5Q9C0B5 715 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 ATG10Q9H0Y0 220 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 C6orf106Q9H6K1 298 aaPredicted RBP13.7□□□□□ -0.22
GPNMB-203ENST00000409458 EBF2Q9HAK2 575 aa13.7□□□□□ -0.22
GPNMB-203ENST00000409458 STOX2Q9P2F5 926 aaPredicted RBP13.7□□□□□ -0.22
GPNMB-203ENST00000409458 C19orf67A6NJJ6 358 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 FPGTO14772 594 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 LATO43561 262 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 ATP5HO75947 161 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 FSBPO95073 299 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CAPN1P07384 714 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 LINC00032P0C843 101 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 ITPKAP23677 461 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 IMPA1P29218 277 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PIK3CGP48736 1102 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PFN3P60673 137 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 RPA4Q13156 261 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TBCCQ15814 346 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 LARP4Q71RC2 724 aaKnown RBP eCLIP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 ASRGL1Q7L266 308 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CHST15Q7LFX5 561 aaPredicted RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 MILR1Q7Z6M3 343 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 KIF2BQ8N4N8 673 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SNX31Q8N9S9 440 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 FBXO15Q8NCQ5 510 aaPredicted RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SLC7A6OSQ96CW6 309 aaPredicted RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TPSD1Q9BZJ3 242 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 FGF22Q9HCT0 170 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 GIMAP2Q9UG22 337 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 POLG2Q9UHN1 485 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SUFUQ9UMX1 484 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 MYO1CO00159 1063 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SLC16A8O95907 504 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 IGHV4-34P06331 123 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 HOXC4P09017 264 aaPredicted RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CALB2P22676 271 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CPA2P48052 419 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 HTR6P50406 440 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 DMPKQ09013 629 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CDC16Q13042 620 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 NFATC4Q14934 902 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PYCR3Q53H96 274 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 METRNLQ641Q3 311 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 KIAA0895LQ68EN5 471 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 AGTRAPQ6RW13 159 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SCIMPQ6UWF3 145 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 EFL1Q7Z2Z2 1120 aaKnown RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 GALNT13Q8IUC8 556 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 CPSF7Q8N684 471 aaKnown RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 FRMD1Q8N878 549 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 BMFQ96LC9 184 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TIMM29Q9BSF4 260 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 NTMT1Q9BV86 223 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 AKTIPQ9H8T0 292 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 TAGLN3Q9UI15 199 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 LNPEPQ9UIQ6 1025 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 MOSPD1Q9UJG1 213 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PSMD13Q9UNM6 376 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 SLC22A14Q9Y267 594 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 PLEKHM1Q9Y4G2 1056 aa13.69□□□□□ -0.22
GPNMB-203ENST00000409458 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms