RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NRTNQ99748 197 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 XKR8Q9H6D3 395 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 ASCL3Q9NQ33 180 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 OR6C2Q9NZP2 312 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 SEMA5BQ9P283 1151 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 PISDQ9UG56 409 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 TRMT6Q9UJA5 497 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 ICKQ9UPZ9 632 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 ESPNB1AK53 854 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 KIF1CO43896 1103 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 RASSF9O75901 435 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 CBSLP0DN79 551 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ENO3P13929 434 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 POLR2CP19387 275 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ECHS1P30084 290 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 SHMT2P34897 504 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 CBSP35520 551 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 CCNFP41002 786 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 CDKN2DP55273 166 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ERVPABLB-1P60509 514 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ILF2Q12905 390 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 KLHL38Q2WGJ6 581 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 TBC1D25Q3MII6 688 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 CACHD1Q5VU97 1274 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 TTC23LQ6PF05 361 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ZC3HC1Q86WB0 502 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 RELL1Q8IUW5 271 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 GPATCH11Q8N954 259 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ZCCHC14Q8WYQ9 949 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 ZNF578Q96N58 590 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 FMO2Q99518 471 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 SMYD2Q9NRG4 433 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 RUVBL2Q9Y230 463 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 VWA7Q9Y334 891 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 NFS1Q9Y697 457 aa19.26■□□□□ 0.67
PDLIM2-207ENST00000409417 AHCTF1Q8WYP5 2266 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 TLCD2A6NGC4 264 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM159BA6NKW6 160 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 EIF3FO00303 357 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 BTN3A3O00478 584 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 PIAS1O75925 651 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 C1orf105O95561 183 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 CCL4P13236 92 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 KYNUQ16719 465 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 IFT20Q8IY31 132 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 ADGRF3Q8IZF5 1079 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 LRRN4CLQ8ND94 238 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 MAGEC3Q8TD91 643 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 MCMBPQ9BTE3 642 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 ZNF768Q9H5H4 540 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 THSD1Q9NS62 852 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 POMT2Q9UKY4 750 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 PCDHGA7Q9Y5G6 932 aa19.25■□□□□ 0.67
PDLIM2-207ENST00000409417 CDRT15L2A8MXV6 281 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 CXorf49A8MYA2 514 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 B4E171 279 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 BTN3A1O00481 513 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 C1QAP02745 245 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 RHOXF2BP0C7M4 288 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 FGF3P11487 239 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 ITIH1P19827 911 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 STX2P32856 288 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 TSPAN7P41732 249 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 RAB28P51157 221 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 GRB7Q14451 532 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 HECTD2Q5U5R9 776 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 CARFQ8N187 725 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 KLHL6Q8WZ60 621 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 UBXN4Q92575 508 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 RAD51AP1Q96B01 352 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 MAP3K3Q99759 626 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 CPNE1Q99829 537 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 RHOXF2Q9BQY4 288 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 MENTQ9BUN1 341 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 RHOJQ9H4E5 214 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 OCIAD1Q9NX40 245 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 TSR3Q9UJK0 312 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 PLAGL1Q9UM63 463 aa19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 URB1O60287 2271 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-207ENST00000409417 IGHV5-51A0A0C4DH38 117 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 GSAPA4D1B5 854 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 EFCAB7A8K855 629 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 C2orf74A8MZ97 194 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 NVLO15381 856 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 PSIP1O75475 530 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 FDXRP22570 491 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 MCM3P25205 808 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 PKLRP30613 574 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 ETV5P41161 510 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 KPNA2P52292 529 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 LRRC8EQ6NSJ5 796 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM45BPQ6NSW5 357 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 CLEC14AQ86T13 490 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 PROSER1Q86XN7 944 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM129CQ86XR2 697 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 CPNE9Q8IYJ1 553 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 BMPERQ8N8U9 685 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM45AQ8TCE6 357 aa19.23■□□□□ 0.67
PDLIM2-207ENST00000409417 ASB11Q8WXH4 323 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms