RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 WRAP53Q9BUR4 548 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 PLA2G2FQ9BZM2 168 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 S1PR5Q9H228 398 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 ACTR8Q9H981 624 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 S100A14Q9HCY8 104 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 SPAG4Q9NPE6 437 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 ADA2Q9NZK5 511 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 EPS15L1Q9UBC2 864 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 MBD1Q9UIS9 605 aaPredicted RBP6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 CNOT6Q9ULM6 557 aaKnown RBP6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 GPR34Q9UPC5 381 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 C15orf41Q9Y2V0 281 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 PCDHGA7Q9Y5G6 932 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 PTGDR2Q9Y5Y4 395 aa6.13□□□□□ -1.43
GTF3C3-202ENST00000409364 CHD7Q9P2D1 2997 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 MYOFQ9NZM1 2061 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 A0A1W2PP18 115 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FAM234BA2RU67 622 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GRXCR2A6NFK2 248 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 LIN7AO14910 233 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 LINC01565O15544 149 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 TSPAN6O43657 245 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 AP1G1O43747 822 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 PSIP1O75475 530 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 STAMBPO95630 424 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CATP04040 527 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 C6P13671 934 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 P2RY2P41231 377 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GNPDA1P46926 289 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC6A12P48065 614 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GALK1P51570 392 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 THOP1P52888 689 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CTSCP53634 463 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 DIO3P55073 304 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 KCNK10P57789 538 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FOXM1Q08050 763 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 ABRQ12979 859 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 PRKG2Q13237 762 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CEACAM7Q14002 265 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CCNIQ14094 377 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FLOT2Q14254 428 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 TRIM25Q14258 630 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GRM2Q14416 872 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 ABRAXAS2Q15018 415 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 NR6A1Q15406 480 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 AP5B1Q2VPB7 878 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 PTCHD3Q3KNS1 767 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 VPS26BQ4G0F5 336 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GGTA1PQ4G0N0 100 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SYTL3Q4VX76 610 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 TCHHL1Q5QJ38 904 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 C6orf132Q5T0Z8 1188 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 ZFP1Q6P2D0 407 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SCIMPQ6UWF3 145 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 PARM1Q6UWI2 310 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 MTSS1LQ765P7 747 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 GALNT13Q8IUC8 556 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 VRK3Q8IV63 474 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CHPFQ8IZ52 775 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FAM9CQ8IZT9 166 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SFRP1Q8N474 314 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 L3MBTL4Q8NA19 623 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FBXO15Q8NCQ5 510 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 OR9I1Q8NGQ6 314 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 OR2T11Q8NH01 316 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 KCNV2Q8TDN2 545 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SPDL1Q96EA4 605 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 LINC00615Q96LM1 132 aaPredicted RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 P2RY13Q9BPV8 354 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 HEBP1Q9NRV9 189 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 DNAJC11Q9NVH1 559 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 TMEM181Q9P2C4 612 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 SNX6Q9UNH7 406 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 EIF3LQ9Y262 564 aaKnown RBP6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 ITM2BQ9Y287 266 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 RNF11Q9Y3C5 154 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 FADS3Q9Y5Q0 445 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 STON1Q9Y6Q2 735 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
GTF3C3-202ENST00000409364 ANKRD36A6QL64 1941 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SERTM1A2A2V5 107 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 CCDC154A6NI56 674 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 E7ENX8 843 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MANBAO00462 879 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NR5A2O00482 541 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 LSM1O15116 133 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 INPP4BO15327 924 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 NVLO15381 856 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SPINT1O43278 529 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 MAP3K7O43318 606 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 UGDHO60701 494 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 BCAS2O75934 225 aaPredicted RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 BAG2O95816 211 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 ADH1BP00325 375 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 SLC2A4P14672 509 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 C5AR1P21730 350 aa6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 POLR2JP52435 117 aaKnown RBP6.11□□□□□ -1.43
GTF3C3-202ENST00000409364 METAP1P53582 386 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms