RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MIR1-1HGQ9H1L0 117 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 PLCL2Q9UPR0 1127 aa17.36■□□□□ 0.37
SMPD4-202ENST00000409031 C3P01024 1663 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 SLC1A7O00341 560 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 SORBS2O94875 1100 aaKnown RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 GJB1P08034 283 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 RHOQP17081 205 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PIGFQ07326 219 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ABRQ12979 859 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ADAM15Q13444 863 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PARP15Q460N3 678 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 GPAT3Q53EU6 434 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF697Q5TEC3 545 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 LILRB4Q8NHJ6 448 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 VANGL1Q8TAA9 524 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 TRPM4Q8TD43 1214 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 BPIFB1Q8TDL5 484 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 EMID1Q96A84 441 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CREB3L1Q96BA8 519 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 C2orf49Q9BVC5 232 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 TP63Q9H3D4 680 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF510Q9Y2H8 683 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PTPRJQ12913 1337 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ATN1P54259 1190 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 TAS2R41P59536 307 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ANKDD1AQ495B1 522 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MAPKAP1Q9BPZ7 522 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 HSPE1-MOB4S4R3N1 261 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CDRT1O95170 752 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 SLC25A14O95258 325 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CKMP06732 381 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PBX3P40426 434 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ELAVL2Q12926 359 aaKnown RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 DNAJB7Q7Z6W7 309 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ADGRD2Q7Z7M1 963 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PJA1Q8NG27 643 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ZFP3Q96NJ6 502 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 POLR2J3Q9H1A7 115 aaKnown RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MFSD1Q9H3U5 465 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MEAF6Q9HAF1 191 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PRDM5Q9NQX1 630 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 COL5A2P05997 1499 aaPredicted RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 GPR25O00155 361 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ATE1O95260 518 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 THPOP40225 353 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MAP2K4P45985 399 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 PPP1R3AQ16821 1122 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CPNE9Q8IYJ1 553 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CNIH3Q8TBE1 160 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MRPS31Q92665 395 aaKnown RBP17.35■□□□□ 0.37
SMPD4-202ENST00000409031 EXOC2Q96KP1 924 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 FCRL4Q96PJ5 515 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 ASPNQ9BXN1 380 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 TVP23BQ9NYZ1 205 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 MAP10Q9P2G4 905 aa17.35■□□□□ 0.37
SMPD4-202ENST00000409031 CHURC1-FNTBB4DL54 471 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 RPN2P04844 631 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 HPGDP15428 266 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 GRIK2Q13002 908 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 IDNKQ5T6J7 187 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 MND1Q9BWT6 205 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 CHIAQ9BZP6 476 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 CD93Q9NPY3 652 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 C14orf119Q9NWQ9 140 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 MAFBQ9Y5Q3 323 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 PRSS51A0A1B0GVH4 220 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 NME6O75414 186 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 OR7A10O76100 309 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 HOXC6P09630 235 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 CYP2A6P11509 494 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 MANFP55145 182 aaKnown RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 COQ5Q5HYK3 327 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 HMBOX1Q6NT76 420 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 NUDT18Q6ZVK8 323 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 ASB18Q6ZVZ8 466 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 THUMPD1Q9NXG2 353 aaKnown RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 PCDHB9Q9Y5E1 797 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 CLIC1O00299 241 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 KPNA3O00505 521 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 DFNA5O60443 496 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 ANXA4P09525 319 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 NR4A2P43354 598 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 HCAR3P49019 387 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 STEAP4Q687X5 459 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 MON1AQ86VX9 555 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 ZNF675Q8TD23 568 aa17.34■□□□□ 0.37
SMPD4-202ENST00000409031 RANBP3Q9H6Z4 567 aaPredicted RBP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMPD4-202ENST00000409031 ARPC4-TTLL3A0A0A6YYG9 625 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 UPK1BO75841 260 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 ATP5C1P36542 298 aaKnown RBP17.33■□□□□ 0.37
SMPD4-202ENST00000409031 RPS3AP61247 264 aaKnown RBP17.33■□□□□ 0.37
SMPD4-202ENST00000409031 TOR1AIP2Q8NFQ8 470 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 AARSD1Q9BTE6 412 aaKnown RBP17.33■□□□□ 0.37
SMPD4-202ENST00000409031 MAF1Q9H063 256 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 MNDAP41218 407 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 ANKRD26P1Q6NSI1 321 aa17.33■□□□□ 0.37
SMPD4-202ENST00000409031 CHERPQ8IWX8 916 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms