RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 C14orf80Q86SX3 495 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 ALYREFQ86V81 257 aaKnown RBP4.89□□□□□ -1.63
HDAC9-204ENST00000406451 PYDC1Q8WXC3 89 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 HLA-CQ95604 372 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 NELL2Q99435 816 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 DUX4Q9UBX2 424 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 C3orf18Q9UK00 162 aa4.89□□□□□ -1.63
HDAC9-204ENST00000406451 PTGESO14684 152 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RNGTTO60942 597 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RPTNQ6XPR3 784 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 GALNT7Q86SF2 657 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TMEM139Q8IV31 216 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 FAM3CQ92520 227 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RC3H2Q9HBD1 1191 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ACSS2Q9NR19 701 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 MCM3APO60318 1980 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TLX3O43711 291 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 LILRB3O75022 631 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CLPTM1O96005 669 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PLGP00747 810 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 EPCAMP16422 314 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SERPINB1P30740 379 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 BDKRB1P46663 353 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TAS2R39P59534 338 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 KRR1Q13601 381 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ZBTB6Q15916 424 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 KCTD19Q17RG1 926 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 GPRC6AQ5T6X5 926 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PIK3R6Q5UE93 754 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TTC27Q6P3X3 843 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PAQR3Q6TCH7 311 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 DPY19L3Q6ZPD9 716 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 GK5Q6ZS86 529 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 KCT2Q8NC54 265 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 C19orf18Q8NEA5 215 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 MAGEE2Q8TD90 523 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ART5Q96L15 291 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CNTN6Q9UQ52 1028 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CFL2Q9Y281 166 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ZNF638Q14966 1978 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 METTL18O95568 372 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ACTR3P61158 418 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 NFKB2Q00653 900 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ARL13AQ5H913 290 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 FAM91A1Q658Y4 838 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SLC9A4Q6AI14 798 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RTL10Q7L3V2 364 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 BNIPLQ7Z465 357 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ZNF527Q8NB42 609 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 MYDGFQ969H8 173 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SLC35G5Q96KT7 338 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 HDHD2Q9H0R4 259 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 BATF3Q9NR55 127 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ARID1BQ8NFD5 2236 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 A8MUA0 341 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 HAS3O00219 553 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 DUX1O43812 170 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 NPHS1O60500 1241 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 AP2A2O94973 939 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RYKP34925 604 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 NUP62P37198 522 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PCYT1AP49585 367 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ST13P50502 369 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SLC34A1Q06495 639 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RAPSNQ13702 412 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TIMM50Q3ZCQ8 353 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TMEM156Q8N614 296 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PLEKHO2Q8TD55 490 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 HOPXQ9BPY8 73 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 RTKNQ9BST9 563 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CCDC28BQ9BUN5 200 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PHF11Q9UIL8 331 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PRPF19Q9UMS4 504 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TTC34A8MYJ7 566 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SAP18O00422 153 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 PCDH7O60245 1069 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TMCC2O75069 709 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ARCN1P48444 511 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SUOXP51687 545 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 HERVK_113P63132 956 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 C11orf88Q6PI97 169 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 NAPRTQ6XQN6 538 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 NET1Q7Z628 596 aaPredicted RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ZNF598Q86UK7 904 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SLC39A11Q8N1S5 342 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SMPDL3BQ92485 455 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TMEM125Q96AQ2 219 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 HBEGFQ99075 208 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ERVK-6Q9BXR3 956 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 TBL1XR1Q9BZK7 514 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SLCO1B3Q9NPD5 702 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 DNAAF2Q9NVR5 837 aaKnown RBP4.88□□□□□ -1.63
HDAC9-204ENST00000406451 MEIS3P2A8K0S8 358 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SNX3O60493 162 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CYP11A1P05108 521 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 ZCCHC18P0CG32 403 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 CD247P20963 164 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SP140Q13342 867 aa4.88□□□□□ -1.63
HDAC9-204ENST00000406451 SPIN4Q56A73 249 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms