RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MIA3Q5JRA6 1907 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 ILVBLA1L0T0 632 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 CFAP99D6REC4 459 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 C1QCP02747 245 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 ANXA5P08758 320 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 HSMCR30P0CW71 290 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 UMPSP11172 480 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 PIM1P11309 404 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 MSH3P20585 1137 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 XPAP23025 273 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 HNF1BP35680 557 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 BMXP51813 675 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 PDCD4Q53EL6 469 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 ACBD5Q5T8D3 534 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 RETSATQ6NUM9 610 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 SZRD1Q7Z422 152 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 VTCN1Q7Z7D3 282 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 STK40Q8N2I9 435 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 SLC15A4Q8N697 577 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 PACRGLQ8N7B6 248 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 ZNF583Q96ND8 569 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 IL26Q9NPH9 171 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 SLC6A13Q9NSD5 602 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 TMEM161AQ9NX61 479 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 BLOC1S6Q9UL45 172 aa12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 PDCD11Q14690 1871 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-202ENST00000400555 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 LSM1O15116 133 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 PSMD8P48556 350 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 CD47Q08722 323 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 NKG7Q16617 165 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 FAM180BQ6P0A1 224 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 DLEU7Q6UYE1 221 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 RORBQ92753 470 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 UBE2FQ969M7 185 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 EID2BQ96D98 161 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 CD320Q9NPF0 282 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 GNG14A0A1W2PPG7 69 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 H0YJX3 145 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 CREG1O75629 220 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 OPN1SWP03999 348 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 BCKDHAP12694 445 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 PFKLP17858 780 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 HTR1EP28566 365 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SUSD1Q6UWL2 747 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ADHFE1Q8IWW8 467 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 PSD4Q8NDX1 1056 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 FNDC8Q8TC99 324 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 BCL7CQ8WUZ0 217 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 PDFQ9HBH1 243 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SAMHD1Q9Y3Z3 626 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 PCDHB14Q9Y5E9 798 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 LINC00854A0A1B0GVQ3 168 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ANKRD33BA6NCL7 494 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 FAM20BO75063 409 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ATP6V1G1O75348 118 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 COX7A2P14406 83 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 MAGEA11P43364 429 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 IDH2P48735 452 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 IRF8Q02556 426 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 LRRC74AQ0VAA2 488 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SMN1Q16637 294 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SYT16Q17RD7 645 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 DNAJB7Q7Z6W7 309 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 CACUL1Q86Y37 369 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ZDHHC21Q8IVQ6 265 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 MCOLN3Q8TDD5 553 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SCAMP4Q969E2 229 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 NODALQ96S42 347 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 UHRF1Q96T88 793 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 POLE4Q9NR33 117 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 FAM118AQ9NWS6 357 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 FNIP2Q9P278 1114 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 ZNF229Q9UJW7 825 aa12.39□□□□□ -0.43
PPP4R1-202ENST00000400555 SAP18O00422 153 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 BCKDKO14874 412 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 ANGPTL1O95841 491 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 POU2F1P14859 743 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 POU1F1P28069 291 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 GABRR2P28476 465 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 RPS14P62263 151 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 NFATC3Q12968 1075 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PDE12Q6L8Q7 609 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 SBSNQ6UWP8 590 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 SLCO6A1Q86UG4 719 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 C11orf74Q86VG3 221 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 UTP15Q8TED0 518 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 ACTL8Q9H568 366 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CHCHD3Q9NX63 227 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 PDP1Q9P0J1 537 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CFAP97Q9P2B7 532 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 CLEC4EQ9ULY5 219 aa12.38□□□□□ -0.43
PPP4R1-202ENST00000400555 GMPPBQ9Y5P6 360 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms