RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SPRTNQ9H040 489 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 PRODH2Q9UF12 536 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 NENFQ9UMX5 172 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 PAPPAQ13219 1627 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 VNN1O95497 513 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 CSNK2A2P19784 350 aaPredicted RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 HNRNPA2B1P22626 353 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 DNASE1L1P49184 302 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SMAD4Q13485 552 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 CHRNA6Q15825 494 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 SMG8Q8ND04 991 aaKnown RBP7.8□□□□□ -1.16
USP47-203ENST00000399455 CLSTN3Q9BQT9 956 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MOCS1Q9NZB8 636 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 IKZF3Q9UKT9 509 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
USP47-203ENST00000399455 EDNRBP24530 442 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OMPP47874 163 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TRMT5Q32P41 509 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 TIMM50Q3ZCQ8 353 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 KIAA0895LQ68EN5 471 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 EIF1ADQ8N9N8 165 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 ZNF75CPQ92670 426 aaPredicted RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 ART4Q93070 314 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 C9IYK1 514 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 NPIPA5E9PKD4 350 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 DFNA5O60443 496 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 LRCH4O75427 683 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 CYP11A1P05108 521 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 GP1BBP13224 206 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ANPEPP15144 967 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 EPCAMP16422 314 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 CEBPBP17676 345 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 HERC3Q15034 1050 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SLC30A6Q6NXT4 461 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TFGQ92734 400 aaPredicted RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 TMCO6Q96DC7 493 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 RNF31Q96EP0 1072 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 MAP3K3Q99759 626 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 MS4A12Q9NXJ0 267 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 POU2F3Q9UKI9 436 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 NPIPA1Q9UND3 350 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 E2F3O00716 465 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 CCNB2O95067 398 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SERPINA3P01011 423 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 NAGLUP54802 743 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SLBPQ14493 270 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP47-203ENST00000399455 ARMC3Q5W041 872 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SLC9A4Q6AI14 798 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SPATA6LQ8N4H0 392 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 NOA1Q8NC60 698 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 CCDC54Q8NEL0 328 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OR4C15Q8NGM1 316 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OR9A1PQ8NGU1 263 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TSEN15Q8WW01 171 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 ANKRD7Q92527 254 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 DEFB126Q9BYW3 111 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SDCBP2Q9H190 292 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SEMA4AQ9H3S1 761 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 DDX28Q9NUL7 540 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 TBC1D23Q9NUY8 699 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TAC3Q9UHF0 121 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 PKD1L3Q7Z443 1732 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 GJE1A6NN92 205 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 BRINP1O60477 761 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TGDSO95455 350 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ALDOAP04075 364 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 P04436 131 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 POLR2CP19387 275 aaPredicted RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 OR4D2P58180 307 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ZYG11AQ6WRX3 759 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 LYSMD3Q7Z3D4 306 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OSTM1Q86WC4 334 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OR2T34Q8NGX1 318 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 DNAJB8Q8NHS0 232 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 MMABQ96EY8 250 aaPredicted RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 TDRD1Q9BXT4 1180 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 KCNK13Q9HB14 408 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 PRTFDC1Q9NRG1 225 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 OR6C74A6NCV1 312 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 IQCF5A8MTL0 148 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ARHGEF33A8MVX0 844 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SNAP91O60641 907 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 PRAMEF11O60813 436 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 RBMXL2O75526 392 aaKnown RBP7.79□□□□□ -1.16
USP47-203ENST00000399455 RCVRNP35243 200 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 PPP3R1P63098 170 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ZNF33AQ06730 810 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SERINC3Q13530 473 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SIRPB2Q5JXA9 342 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ZCCHC23Q6ZST2 131 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 PIM3Q86V86 326 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SLC39A11Q8N1S5 342 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 TESCQ96BS2 214 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 GPR62Q9BZJ7 368 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 SP140LQ9H930 580 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 MAGEL2Q9UJ55 1249 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 MYH8P13535 1937 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 NUP98P52948 1817 aa7.79□□□□□ -1.16
USP47-203ENST00000399455 ERI3O43414 337 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms