RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 F8VP50 259 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 RPP14O95059 124 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PSMG1O95456 288 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 FCER2P06734 321 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ETS2P15036 469 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CD19P15391 556 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PTPN1P18031 435 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CDKN2BP42772 138 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 DCDC1P59894 354 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 IFITM2Q01629 132 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TRA2AQ13595 282 aaKnown RBP eCLIP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SMCO1Q147U7 214 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 EMC2Q15006 297 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 VITQ6UXI7 678 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 BBS12Q6ZW61 710 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 C12orf40Q86WS4 652 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TRIM69Q86WT6 500 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CDAN1Q8IWY9 1227 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MICU2Q8IYU8 434 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF786Q8N393 782 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 OR13C3Q8NGS6 347 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 RNASE11Q8TAA1 199 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SLC35B2Q8TB61 432 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF516Q92618 1163 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 DGCR14Q96DF8 476 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ABHD17AQ96GS6 310 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ZNF333Q96JL9 665 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 NEU1Q99519 415 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 POTEKPQ9BYX7 375 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CATSPERBQ9H7T0 1116 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 JPH1Q9HDC5 661 aaPredicted RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TBC1D13Q9NVG8 400 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ATP23Q9Y6H3 246 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PGK2P07205 417 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 HOXA9P31269 272 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CSNK1DP48730 415 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SOX10P56693 466 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TAS2R60P59551 318 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PRKAA1Q13131 559 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TFDP2Q14188 446 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PCBP1Q15365 356 aaKnown RBP eCLIP6.47□□□□□ -1.378e-9■■■■□ 19.4
TM9SF4-202ENST00000398022 FAM189A2Q15884 450 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 FAM160B1Q5W0V3 765 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 GPAT2Q6NUI2 795 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CNKSR3Q6P9H4 555 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MOB2Q70IA6 237 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TMPRSS6Q8IU80 811 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CPOQ8IVL8 374 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 OXNAD1Q96HP4 312 aaPredicted RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 KLF6Q99612 283 aaPredicted RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PTPN18Q99952 460 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 DPYSL5Q9BPU6 564 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CNTN6Q9UQ52 1028 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MAN2B2Q9Y2E5 1009 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MN1Q10571 1320 aaPredicted RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MYH9P35579 1960 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 BTBD17A6NE02 478 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TNPO2O14787 897 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MFN2O95140 757 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 OAZ2O95190 189 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MYL2P10916 166 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 NAMPTP43490 491 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 LEPRP48357 1165 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 RAD23AP54725 363 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 GDF10P55107 478 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TNFRSF17Q02223 184 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SEC23BQ15437 767 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 EIF2S3LQ2VIR3 472 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TRMT5Q32P41 509 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 KHDC1Q4VXA5 237 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■□□ 18.1
TM9SF4-202ENST00000398022 MPP7Q5T2T1 576 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 GARNL3Q5VVW2 1013 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 DCDC5Q6ZRR9 648 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CRLF3Q8IUI8 442 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SCN4BQ8IWT1 228 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SFRP1Q8N474 314 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TRAM1L1Q8N609 369 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CATSPER1Q8NEC5 780 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 AGBL3Q8NEM8 1001 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 CD300LFQ8TDQ1 290 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 SIPA1Q96FS4 1042 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 TMEM80Q96HE8 168 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 MAGEH1Q9H213 219 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 UNKLQ9H9P5 680 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 THG1LQ9NWX6 298 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 KCNK4Q9NYG8 393 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 ACTR10Q9NZ32 417 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 STAP1Q9ULZ2 295 aa6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 PUS1Q9Y606 427 aaKnown RBP eCLIP6.47□□□□□ -1.37
TM9SF4-202ENST00000398022 B2RBV5 119 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 FCHO1O14526 889 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 SOCS6O14544 535 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 VNN1O95497 513 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 GM2AP17900 193 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 GPR4P46093 362 aa6.46□□□□□ -1.37
TM9SF4-202ENST00000398022 CDC34P49427 236 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms