RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 KLHL38Q2WGJ6 581 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 STRA8Q7Z7C7 330 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 GALNT7Q86SF2 657 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 SEC14L1Q92503 715 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 UBXN4Q92575 508 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 MAP3K3Q99759 626 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 ASCL3Q9NQ33 180 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 TXNDC16Q9P2K2 825 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 ICKQ9UPZ9 632 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 RAXQ9Y2V3 346 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 C2orf74A8MZ97 194 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 BTN3A3O00478 584 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 BTN3A1O00481 513 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 MAP3K7O43318 606 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 CDH3P22223 829 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 SLC5A2P31639 672 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 CCNFP41002 786 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 CUL1Q13616 776 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 PRSS42Q7Z5A4 293 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 RAD51AP1Q96B01 352 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 DCBLD2Q96PD2 775 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 FAM129AQ9BZQ8 928 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 TSPYL1Q9H0U9 437 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 ZNF768Q9H5H4 540 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 WDR70Q9NW82 654 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 CIDEBQ9UHD4 219 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 CORO1CQ9ULV4 474 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 RUVBL2Q9Y230 463 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 NFS1Q9Y697 457 aa24.61■■□□□ 1.53
TSPAN4-207ENST00000397411 PIPSLA2A3N6 862 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 TLCD2A6NGC4 264 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 B4E171 279 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 RRP8O43159 456 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 ENO3P13929 434 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 MCM3P25205 808 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 TSPAN7P41732 249 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 PCBP4P57723 403 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 FOXM1Q08050 763 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 KYNUQ16719 465 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 RBM20Q5T481 1227 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 DCAF12Q5T6F0 453 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 LRRC69Q6ZNQ3 347 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 SLC26A11Q86WA9 606 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 SLC30A3Q99726 388 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 NRTNQ99748 197 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 ZDHHC18Q9NUE0 388 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 ACTR10Q9NZ32 417 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 OR6C2Q9NZP2 312 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 VWA7Q9Y334 891 aa24.6■■□□□ 1.53
TSPAN4-207ENST00000397411 IGHV5-51A0A0C4DH38 117 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 CDRT15L2A8MXV6 281 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 ISM1B1AKI9 464 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 NVLO15381 856 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 TLX3O43711 291 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 C1orf105O95561 183 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 CBSLP0DN79 551 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 SAT1P21673 171 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 CBSP35520 551 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 BDKRB1P46663 353 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 RGS4P49798 205 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 KPNA2P52292 529 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 MC2RQ01718 297 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 PDAP1Q13442 181 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 GBX1Q14549 363 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 FAM45BPQ6NSW5 357 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 NEK10Q6ZWH5 1172 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 CPNE9Q8IYJ1 553 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 ADGRF3Q8IZF5 1079 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 FAM45AQ8TCE6 357 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 NAF1Q96HR8 494 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 ELMO2Q96JJ3 720 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 ASPSCR1Q9BZE9 553 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 SOHLH2Q9NX45 425 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 LNPEPQ9UIQ6 1025 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 PCDHGA7Q9Y5G6 932 aa24.59■■□□□ 1.53
TSPAN4-207ENST00000397411 TAF4O00268 1085 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 POLR1CO15160 346 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 CATP04040 527 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 MPC1LP0DKB6 136 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 MAP4P27816 1152 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 PRDX3P30048 256 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 RAB28P51157 221 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 RAB15P59190 212 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 TMTC4Q5T4D3 741 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 HECTD2Q5U5R9 776 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 CLEC14AQ86T13 490 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 KMT5CQ86Y97 462 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 CTAGE3PQ8IX95 158 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 IFT20Q8IY31 132 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 ZNF248Q8NDW4 579 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 GIMAP7Q8NHV1 300 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 CD200R1Q8TD46 325 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 KLHL6Q8WZ60 621 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 RAB11FIP5Q9BXF6 653 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 POMT2Q9UKY4 750 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 MED16Q9Y2X0 877 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 PCDHB11Q9Y5F2 797 aa24.58■■□□□ 1.53
TSPAN4-207ENST00000397411 TCRBV9S1A1TA0A576 114 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 PRAMEF10O60809 474 aa24.57■■□□□ 1.52
TSPAN4-207ENST00000397411 SPAG6O75602 509 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms