RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ADAMTSL2Q86TH1 951 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 ISCA2Q86U28 154 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 LCA5Q86VQ0 697 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 DCUN1D3Q8IWE4 304 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 MAGEC3Q8TD91 643 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 RHBDD1Q8TEB9 315 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 KIAA1191Q96A73 305 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC12A9Q9BXP2 914 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 POLG2Q9UHN1 485 aa22.98■■□□□ 1.27
TSPAN4-203ENST00000397397 PABPN1LA6NDY0 278 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 GLRA3O75311 464 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 CREB1P16220 341 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 FASLGP48023 281 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 CCT5P48643 541 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 KPNA2P52292 529 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 SBSNQ6UWP8 590 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 MCOLN3Q8TDD5 553 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 DLG3Q92796 817 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 ALKBH8Q96BT7 664 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 CAMK1GQ96NX5 476 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 PARVBQ9HBI1 364 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 SLC40A1Q9NP59 571 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 NCKIPSDQ9NZQ3 722 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 PADI4Q9UM07 663 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 PDE10AQ9Y233 779 aa22.97■■□□□ 1.27
TSPAN4-203ENST00000397397 SH3BP5O60239 455 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 SPAG7O75391 227 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 SYF2O95926 243 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 CRHR1P34998 444 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 PHKG1Q16816 387 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 CCSMST1Q4G0I0 132 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 FRA10AC1Q70Z53 315 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 NAXDQ8IW45 347 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 RBM12BQ8IXT5 1001 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 BANPQ8N9N5 519 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 FBXO15Q8NCQ5 510 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 STAG3L4Q8TBR4 150 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 RAD51AP1Q96B01 352 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 TLCD1Q96CP7 247 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 APOPT1Q96IL0 206 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 PKNOX2Q96KN3 472 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 TRIM54Q9BYV2 358 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 CIDEBQ9UHD4 219 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 RNF112Q9ULX5 631 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 RNF215Q9Y6U7 377 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 DMXL1Q9Y485 3027 aa22.96■■□□□ 1.27
TSPAN4-203ENST00000397397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 RHPN2P1A8MT19 583 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 PPM1DO15297 605 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 LDOC1O95751 146 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 ENO2P09104 434 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 RBP1P09455 135 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 HIST1H2AGP0C0S8 130 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 HIST1H2ADP20671 130 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 MAGOHP61326 146 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 DAB2P98082 770 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 GPR18Q14330 331 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 RSPO4Q2I0M5 234 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 PROX2Q3B8N5 592 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 TECRLQ5HYJ1 363 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 N4BP2L1Q5TBK1 243 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 C16orf46Q6P387 395 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 CDHR3Q6ZTQ4 885 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 GPSM1Q86YR5 675 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 ZFPM2Q8WW38 1151 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 EXT2Q93063 718 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 SH3KBP1Q96B97 665 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 HIST1H2AHQ96KK5 128 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 CNDP2Q96KP4 475 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 HIST1H2AJQ99878 128 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 H2AFJQ9BTM1 129 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 KIR3DX1Q9H7L2 352 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 MKS1Q9NXB0 559 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 UTP6Q9NYH9 597 aaKnown RBP22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 TMEM216Q9P0N5 145 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 LRIT1Q9P2V4 623 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 PLAGL1Q9UM63 463 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 OARD1Q9Y530 152 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 ACTL7BQ9Y614 415 aa22.95■■□□□ 1.26
TSPAN4-203ENST00000397397 ASCC3Q8N3C0 2202 aaKnown RBP22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 ANKRD12Q6UB98 2062 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 LY6G6EA0A0G2JKS1 128 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 CCDC189A1A4V9 331 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 KRT87PA6NCN2 255 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 PPP1R3AQ16821 1122 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 TTMPQ5BVD1 217 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 TMEM26Q6ZUK4 368 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 ZNF761Q86XN6 746 aaPredicted RBP22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 OR52E1Q8NGJ3 308 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 OR9A1PQ8NGU1 263 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 RHEBL1Q8TAI7 183 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 JPH3Q8WXH2 748 aaPredicted RBP22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 ATP6V1G3Q96LB4 118 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 PKP4Q99569 1192 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 IQCGQ9H095 443 aaKnown RBP22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 EVA1BQ9NVM1 165 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 FTSJ1Q9UET6 329 aa22.94■■□□□ 1.26
TSPAN4-203ENST00000397397 GRID1Q9ULK0 1009 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms