RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ALG9Q9H6U8 611 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 TSR3Q9UJK0 312 aaKnown RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 EIF3FO00303 357 aaPredicted RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 BTN3A1O00481 513 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 ZBTB14O43829 449 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 NUAK1O60285 661 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 SDC3O75056 442 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 HOXC4P09017 264 aaPredicted RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 GSTM1P09488 218 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 ENO3P13929 434 aaPredicted RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 TAC1P20366 129 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 HTR1BP28222 390 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 PBLDP30039 288 aaPredicted RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 CLDN2P57739 230 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CXADRP78310 365 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 GSTM4Q03013 218 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CDCP2Q5VXM1 449 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CRTC3Q6UUV7 619 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 LRRTM4Q86VH4 590 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 TRIM42Q8IWZ5 723 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 PPP1R14CQ8TAE6 165 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 STAG3L4Q8TBR4 150 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 LRRC8CQ8TDW0 803 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 SKA2Q8WVK7 121 aaPredicted RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 CKAP2Q8WWK9 683 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 TMEM159Q96B96 161 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 WBP1Q96G27 269 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 PDLIM5Q96HC4 596 aaKnown RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 MAGEB18Q96M61 343 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 TFB2MQ9H5Q4 396 aaKnown RBP12.95□□□□□ -0.34
SEC13-209ENST00000397117 COPG2Q9UBF2 871 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 FAM8A1Q9UBU6 413 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 ZNHIT2Q9UHR6 403 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 HS3ST3A1Q9Y663 406 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CCDC189A1A4V9 331 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 POM121BA6NF01 834 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 ERVH48-1M5A8F1 160 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 TSPAN12O95859 305 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 BPGMP07738 259 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 GIMD1P0DJR0 217 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 KELP23276 732 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 LSP1P33241 339 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 PDK4Q16654 411 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 ACSBG2Q5FVE4 666 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 TECRLQ5HYJ1 363 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 ZYG11AQ6WRX3 759 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 PIWIL4Q7Z3Z4 852 aaKnown RBP12.94□□□□□ -0.34
SEC13-209ENST00000397117 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 ZNF248Q8NDW4 579 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 OR4C6Q8NH72 309 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 KIAA1191Q96A73 305 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 KLHDC7BQ96G42 594 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 ZNF578Q96N58 590 aaPredicted RBP12.94□□□□□ -0.34
SEC13-209ENST00000397117 MECRQ9BV79 373 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 RMI1Q9H9A7 625 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 RNF112Q9ULX5 631 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 CA5BQ9Y2D0 317 aa12.94□□□□□ -0.34
SEC13-209ENST00000397117 NPEPPSL1A6NEC2 478 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 SYCE1LA8MT33 242 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 TOR1BO14657 336 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 CHUKO15111 745 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 KMOO15229 486 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 GRID2O43424 1007 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 SMIM24O75264 130 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 POP7O75817 140 aaKnown RBP12.93□□□□□ -0.34
SEC13-209ENST00000397117 RABIFP47224 123 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 THOP1P52888 689 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 YPEL5P62699 121 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
SEC13-209ENST00000397117 PLA2G4EQ3MJ16 856 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 FRA10AC1Q70Z53 315 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 C10orf107Q8IVU9 208 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 CFAP206Q8IYR0 622 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 EXT2Q93063 718 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 PTERQ96BW5 349 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 LINC00615Q96LM1 132 aaPredicted RBP12.93□□□□□ -0.34
SEC13-209ENST00000397117 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 MANSC1Q9H8J5 431 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 UCKL1Q9NWZ5 548 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 SLC17A4Q9Y2C5 497 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 PRKAB1Q9Y478 270 aa12.93□□□□□ -0.34
SEC13-209ENST00000397117 DNMT3AQ9Y6K1 912 aaPredicted RBP12.93□□□□□ -0.34
SEC13-209ENST00000397117 C17orf113A0A1B0GUU1 675 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 KLHL33A6NCF5 533 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 TMEM202A6NGA9 273 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 G3V2L1 256 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 J3QKU1 62 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 CDC7O00311 574 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 LIN7AO14910 233 aaPredicted RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 KERAO60938 352 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
SEC13-209ENST00000397117 BGNP21810 368 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
SEC13-209ENST00000397117 PCBP4P57723 403 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms