RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MEN1O00255 615 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CD3EAPO15446 510 aaKnown RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 SNRNP200O75643 2136 aaKnown RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 CTSBP07858 339 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CHRM5P08912 532 aaPredicted RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 NMBRP28336 390 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 RORAP35398 523 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 RPS15P62841 145 aaKnown RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 TLE1Q04724 770 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 HSPA14Q0VDF9 509 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 FAM20CQ8IXL6 584 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 DSELQ8IZU8 1212 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 OR5K2Q8NHB8 316 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CPT1BQ92523 772 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CLIP3Q96DZ5 547 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 SGSM3Q96HU1 749 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 TTC1Q99614 292 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 AP1M1Q9BXS5 423 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 GPR87Q9BY21 358 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 TRIM55Q9BYV6 548 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CLMPQ9H6B4 373 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 FANCEQ9HB96 536 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 EIF2B3Q9NR50 452 aaKnown RBP17.7■□□□□ 0.42
FXN-203ENST00000396366 TREX1Q9NSU2 369 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 CATSPERZQ9NTU4 200 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 PCMTD2Q9NV79 361 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 TLK1Q9UKI8 766 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 TP53TG5Q9Y2B4 290 aa17.7■□□□□ 0.42
FXN-203ENST00000396366 KLK3P07288 261 aaPredicted RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 MGAT1P26572 445 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 PEBP1P30086 187 aaKnown RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 SHMT2P34897 504 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 UGT8Q16880 541 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 DEFB110Q30KQ9 67 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 PTCHD3Q3KNS1 767 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 SLC22A15Q8IZD6 547 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 C2orf73Q8N5S3 287 aaPredicted RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 ENDOVQ8N8Q3 282 aaKnown RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 PRELID2Q8N945 189 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 CFAP61Q8NHU2 1237 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 CARD6Q9BX69 1037 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 SPRTNQ9H040 489 aaPredicted RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 EPN3Q9H201 632 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 ACTR5Q9H9F9 607 aaPredicted RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 SYBUQ9NX95 663 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 POLG2Q9UHN1 485 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 SERTAD3Q9UJW9 196 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 ANAPC5Q9UJX4 755 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 TTC7AQ9ULT0 858 aaPredicted RBP17.69■□□□□ 0.42
FXN-203ENST00000396366 MAN2B2Q9Y2E5 1009 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 PPP2R2CQ9Y2T4 447 aa17.69■□□□□ 0.42
FXN-203ENST00000396366 FLNCQ14315 2725 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 ZNF749O43361 778 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 GPC4O75487 556 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 RECKO95980 971 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 CAPN1P07384 714 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 MSL3P1P0C860 447 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 CYP2A7P20853 494 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 AOAHP28039 575 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 NPY2RP49146 381 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 CSRP3P50461 194 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 CHAF1BQ13112 559 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 GRB7Q14451 532 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 LACTB2Q53H82 288 aaPredicted RBP17.68■□□□□ 0.42
FXN-203ENST00000396366 IZUMO3Q5VZ72 239 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 CPZQ66K79 652 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 C19orf47Q8N9M1 422 aaKnown RBP17.68■□□□□ 0.42
FXN-203ENST00000396366 TRIM58Q8NG06 486 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 PEX13Q92968 403 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 MFSD3Q96ES6 412 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 MS4A14Q96JA4 679 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 LRFN5Q96NI6 719 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 SPENQ96T58 3664 aaKnown RBP17.68■□□□□ 0.42
FXN-203ENST00000396366 P2RY12Q9H244 342 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 SYTL2Q9HCH5 934 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 KLHL20Q9Y2M5 609 aa17.68■□□□□ 0.42
FXN-203ENST00000396366 TNRC6AQ8NDV7 1962 aaKnown RBP17.68■□□□□ 0.42
FXN-203ENST00000396366 ISM1B1AKI9 464 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 GOLGA8KD6RF30 607 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 GOLGA8TH3BQL2 631 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 MAP3K7O43318 606 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 AVILO75366 819 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 PDGFAP04085 211 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 ARNTP27540 789 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 GABRA4P48169 554 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 VPS41P49754 854 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 PMS2P54278 862 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 ITGA1P56199 1179 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
FXN-203ENST00000396366 TTC27Q6P3X3 843 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 SYVN1Q86TM6 617 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 HOOK3Q86VS8 718 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 SYTL1Q8IYJ3 562 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 LINC01555Q8NAE3 123 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 MAIP1Q8WWC4 291 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 ASZ1Q8WWH4 475 aa17.67■□□□□ 0.42
FXN-203ENST00000396366 IL17FQ96PD4 163 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms