RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ICKQ9UPZ9 632 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 ALG6Q9Y672 507 aa20.4■□□□□ 0.86
TRAF4-203ENST00000394925 CNOT3O75175 753 aaKnown RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 CTSBP07858 339 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 CD63P08962 238 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 UGT2B7P16662 529 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 PSMB4P28070 264 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 MC4RP32245 332 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 MARCKSL1P49006 195 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 RPA4Q13156 261 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 MSLNQ13421 630 aaPredicted RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 TRIM14Q14142 442 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 TCEAL1Q15170 157 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 Q6ZS92 163 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 PPP1R32Q7Z5V6 425 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 TICAM1Q8IUC6 712 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 KATNAL2Q8IYT4 538 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 RCOR2Q8IZ40 523 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 ZNF655Q8N720 491 aaPredicted RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 PROKR1Q8TCW9 393 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 UBE2Q2Q8WVN8 375 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 PTERQ96BW5 349 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 OR2A14Q96R47 310 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 BARD1Q99728 777 aaKnown RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 ATP13A2Q9NQ11 1180 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 ABHD10Q9NUJ1 306 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 TXLNGQ9NUQ3 528 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 IRAK4Q9NWZ3 460 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 AAR2Q9Y312 384 aaKnown RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 PCDHGA10Q9Y5H3 936 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 SVILO95425 2214 aa20.39■□□□□ 0.85
TRAF4-203ENST00000394925 SNRNP200O75643 2136 aaKnown RBP20.39■□□□□ 0.85
TRAF4-203ENST00000394925 DOCK10Q96BY6 2186 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 IGLV3-16A0A075B6K0 115 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 ZSCAN9O15535 394 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-203ENST00000394925 PRSS56P0CW18 603 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 GABRA4P48169 554 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 CYP2A13Q16696 494 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 GPR33Q49SQ1 333 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 C1QL3Q5VWW1 255 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 UNC5AQ6ZN44 842 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 SERPINA9Q86WD7 417 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 CLDN19Q8N6F1 224 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 OR5AR1Q8NGP9 310 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 AP1M1Q9BXS5 423 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 INTUQ9ULD6 942 aa20.38■□□□□ 0.85
TRAF4-203ENST00000394925 APOC4-APOC2K7ER74 178 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 APOC2P02655 101 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 UMODP07911 640 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 ACRV1P26436 265 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 SHMT2P34897 504 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 SOX8P57073 446 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 PRPSAP1Q14558 356 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 NKAIN1Q4KMZ8 207 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 ANKRD20A2Q5SQ80 823 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 CCDC181Q5TID7 509 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 ANKRD20A1Q5TYW2 823 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 ANKRD20A3Q5VUR7 823 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 MRPL14Q6P1L8 145 aaKnown RBP20.37■□□□□ 0.85
TRAF4-203ENST00000394925 BBS12Q6ZW61 710 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 TAS2R42Q7RTR8 314 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 ZGRF1Q86YA3 2104 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 SRRM1Q8IYB3 904 aaKnown RBP20.37■□□□□ 0.85
TRAF4-203ENST00000394925 DNAJC1Q96KC8 554 aaKnown RBP20.37■□□□□ 0.85
TRAF4-203ENST00000394925 FERMT1Q9BQL6 677 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 AGPAT4Q9NRZ5 378 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 SPHK1Q9NYA1 384 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 SRPK3Q9UPE1 567 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 CSAG2Q9Y5P2 127 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 CROCCQ5TZA2 2017 aa20.37■□□□□ 0.85
TRAF4-203ENST00000394925 CSMD1Q96PZ7 3565 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 PCM1Q15154 2024 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 CHRM5P08912 532 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-203ENST00000394925 TPM1P09493 284 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 ITGA3P26006 1051 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 TNFRSF8P28908 595 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 SPARCL1Q14515 664 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 DENND5AQ6IQ26 1287 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 ST6GALNAC3Q8NDV1 305 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 TBL1YQ9BQ87 522 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 ASF1AQ9Y294 204 aa20.36■□□□□ 0.85
TRAF4-203ENST00000394925 TDRKHQ9Y2W6 561 aaKnown RBP20.36■□□□□ 0.85
TRAF4-203ENST00000394925 NUP210LQ5VU65 1888 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 TRBV5-4A0A0C4DH59 114 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 A0A0J9YY10 115 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 MACROD2A1Z1Q3 448 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 AGPSO00116 658 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 BRD3Q15059 726 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 HIF1AQ16665 826 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 TLDC1Q6P9B6 456 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 FLVCR1-AS1Q8TAF5 88 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 KRT35Q92764 455 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 C19orf43Q9BQ61 176 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 WDR77Q9BQA1 342 aaPredicted RBP20.35■□□□□ 0.85
TRAF4-203ENST00000394925 NDC1Q9BTX1 674 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 CHRNA10Q9GZZ6 450 aa20.35■□□□□ 0.85
TRAF4-203ENST00000394925 KCNN4O15554 427 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 MFAP3LO75121 409 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 ALOX12BO75342 701 aa20.34■□□□□ 0.85
TRAF4-203ENST00000394925 ALAS2P22557 587 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms